Pseudomonas chlororaphis EA105, NZ35_RS06260

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis strain EA105 contig_2, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GAGCAACTTCCCGCGCCGCAACCGGATCATCAGCGGTTTGTCCCTTGGCGTACTGGTGGTCGAGGCGAGTGTCGCCAGTGGTTCATTGATCACCGCGCGG CTGGCCGCGGAACAGGGTCGCGAGGTTTATGCCATTCCCGGTTCGATCCATCACCCCGGCGCGCGCGGTTGTCACCAATTGATTCGCGACGGTGCGGTGT TGGTGGAAACCATCGAGCACATCCTCGAAGCCCTGCGTGGCTGGCAGCATTTGCCATTGTCCGCAGACACAGCGAAAGTCGATCATCCATTGCTCTTATT GCTGCACGCCGCGCCGCACACCAGCGAAGGCTTGGCCGACAGCAGCGGCTGGGCGTTACCGAAAGTTCTGGCGGCACTCACCGAACTGGAAATGGATGGT CGTGCGGTGTGCGAAAACGGTCGCTGGTTGGCCAGGACACGCTAGGTTTTACAAGGAAGATCGGTAAACTGCGCGAAACCTGTTTGCGGAGAGTTTTTTC
DNA Sequence for Gene
>NZ35_RS06260
ATGGTCAACAGTTGGCGTGTGCAACAAGCCGCACGAGAGATTCGCGCCGGGGCGGTGATTGCCTATCCAACCGAAGCCGTCTGGGGGCTGGGTTGCGACC CGTGGAACGAAGAGGCCGTGGATCGGTTGCTGGCGATCAAGAATCGATCGGTGGTCAAAGGGCTGATTCTGGTTGCCGACAACATTCGCCAGTTCGACTT CCTGTTCGAAGACTTCCCGCAAGAATGGATCGATCGCATGGCCAGCACCTGGCCGGGACCGAACACTTGGCTGGTACCGCATCAAGGCTTGTTGCCCGAA TGGGTGACTGGCGTGCACGACACGGTGGCGCTGCGGGTCAGCGATCACCCGCAGGTACGCGATCTGTGTTCGATGGTCGGGCCATTGATTTCGACCTCTG CCAACCCGCAGGGTCGCCCGGCGGCGCGTACCCGATTGCGTGTCGAGCAGTATTTCCGTGGGCAGATCGATCTGATACTGGGCGGGCAACTGGGTGGGCG CAAGAACCCCAGCGTGATCCGTGATCTGGCGACCGGCAAAGTCATTCGTCCCGACTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCCAGCCTCGAACATTTGTAACGTGAGTACTCATCACCTTGACGGCGAGGAGTACTACACGTGCCTGCGATTTATCCTGCAATGATGCTTGTTGTTGCGT CGGAAAAGTCCTCAACTGCTTGGATCAACTGAATTTTCCCACCTGATTATCAGACCGCGTTTCGTGGCGGTATCGTCAAAAGCAACCATCCTTTCCCTGC ACTCGGAACACTTCGATAAGTTATGGACTGCGGAGAAAGAATGGACACTACGGATTTGCAACTCACGGATTACCTGCAGGCGCTCCAGGTGACGTTAAAC AGTCATCAGGAGGGATGCCGTATCGTGATGCTTGAAGCGGGGTCGGATACCCAAGTGTTCGATCGGTTTATCGAACGGCAATTTCGGCTTCGGCTGCAGC ATTACATGCTGACGTCCAGGGCGCGGATGCTCGAAACCCGACTGGCGACACGCTCGCGCAGTACCCACTTTCTGCTGTATCGGCACGAGCAGTTGCAGGC
Amino Acid Sequence
>tRNA threonylcarbamoyladenosine biosynthesis protein RimN
MVNSWRVQQAAREIRAGAVIAYPTEAVWGLGCDPWNEEAVDRLLAIKNRSVVKGLILVADNIRQFDFLFEDFPQEWIDRMASTWPGPNTWLVPHQGLLPE WVTGVHDTVALRVSDHPQVRDLCSMVGPLISTSANPQGRPAARTRLRVEQYFRGQIDLILGGQLGGRKNPSVIRDLATGKVIRPD
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site