Strain | Pseudomonas chlororaphis strain EA105 contig_2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TTCAGCCAGACTTCCCAGCCCAAACCCCAGGCGCCGAGGGTCGGCGATTCCCAGTTGTCTTCGACGAAGCGAATGTCGTGGACCAGCGGGTCCAGGCCGA CATGCTTGAGCGAGCCCAGGTACAGTTCCTGGAAGTTGTCCGGGTTCGGCTTCAGGACGACCTGGAACTGATAGTAGTGCTGCAGACGGTTCGGGTTTTC GCCGTAGCGGCCGTCAGTCGGACGGCGGCTTGGCTGCACGTAGGCGGCGTTCCAGGTTTCCGGGCCGATGGCACGGAGGAAGGTCGCGGTGTGGAAAGTG CCGGCGCCTACTTCCATATCGTAGGGCTGAAGTACCACGCAACCTTGCTCGGCCCAGTATTGCTGGAGCGCGAGGATCAAGTCTTGGAAGGTACGCACGG CTGGCGTAGGCTGGCTCACGAAATTCACCTGTTTCTTGGGCTGCGATTTAAAGAGCGGGAGTATACCCGATTCATTGCTGCGCACGCCCCCTGGAGCCTT
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DNA Sequence for Gene |
>NZ35_RS06210
ATGCCACGCTGCTTTTGGTGTACCGAAGATCCGCTGTACATGGCTTATCACGACCAGGAGTGGGGCACGCCGCTACGCGATGCGCAGGGTTTGTTCGAGT TGCTTTTGCTCGAAGGGTTCCAGGCCGGGCTGTCGTGGATCACCGTGCTGCGCAAACGCGAGCGTTATCGCGAGGTGTTGTTCGGCTTCGATGTGCAGCG CGTGGCGCAGATGAGCGACGCCGAAATCGACGAATTGATGCTCGATCCGGGGATCATCCGCAACCGCCTCAAACTCAATGCCGCCCGCCGTAATGCCCAA GCCTGGCTGGCGCTGGAGGATCCGGTGGGGTTCCTCTGGTCGTTCGTTAACGACCAACCGATCATCAATCATTTCAAGGATCGCAGCGAAGTCCCGGCGA TCACCCCCGAAGCGCTGGCGATGAGCAAAGCCCTGAAAAAGGCCGGGTTCACGTTCGTCGGCCCGACCATTTGCTACGCACTGATGCAGGCCTCGGGCAT GGTCATGGACCACACCCAGGACTGCGACCGCTACGCGCAGCTCGTCAACGGCGGTTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AATGGCCGCCTCGCGCACCGCACAAGATCAGGAGTGACCTGTGGAAAAGTTTAAAGGCGCCTTGCTGGTAGGCGCTCTGCGGCTGTTTGCCCTGCTGCCA TGGCGGGCCGTGCAGGCCGTGGGTTCGGCGATCGGCTGGATCATGTGGAAAACCCCCAACCGCTCCCGCGACGTGGTGCGGATCAACCTAGCGAAATGTT TTCCACAGATGGATCCGGCCGAACGTGAGCGTCTGGTCGGGCAGAGCCTGAAAGACATCGGCAAGTCGTTGACCGAAAGCGCCTGCGCGTGGATCTGGCC GGCGCAGCGTTCGATCGATCTGGTGCGCGAAGTCGAAGGCCTCGACGTGCTGAAAGACGCCTTGGCCTCGGGCAAGGGCGTGGTCGGCATCACCAGCCAC CTGGGCAATTGGGAAGTGCTCAACCACTTCTATTGCAGCCAGTGCAAACCGATCATTTTCTATCGCCCGCCGAAGCTCAAGGCTGTGGACGAATTGCTGC
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Amino Acid Sequence |
>3-methyladenine DNA glycosylase
MPRCFWCTEDPLYMAYHDQEWGTPLRDAQGLFELLLLEGFQAGLSWITVLRKRERYREVLFGFDVQRVAQMSDAEIDELMLDPGIIRNRLKLNAARRNAQ AWLALEDPVGFLWSFVNDQPIINHFKDRSEVPAITPEALAMSKALKKAGFTFVGPTICYALMQASGMVMDHTQDCDRYAQLVNGG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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