Pseudomonas chlororaphis EA105, NZ35_RS05340

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis strain EA105 contig_2, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TTCGCATCACCCGCATGCGTGCATAACTCAACCATTACAAGGAGTCATACATGACCAAGACTGTTATCACCAGCGACAAGGCCCCGGCCGCCATCGGTAC TTACTCCCAGGCGATCAAGGCCGGCAACACTGTTTACATGTCGGGCCAGATTCCTCTGGACCCAAAAACCATGGAACTGGTTGAAGGCTTCGAAGCCCAG ACCGTCCAGGTGTTCGAGAACCTCAAAGCCGTGGCTGAAGCTGCTGGCGGTTCGTTCAAGGACATCGTCAAACTGAACATCTTCCTCACCGACCTGAGCC ACTTCGCCAAGGTCAACGAGATCATGGGCAAGTACTTCGACCAGCCATACCCGGCCCGCGCTGCCATCGGCGTTGCTGCCCTGCCAAAGGGTTCGCAGGT TGAAATGGATGCCATTCTGGTCATCGAGTGATGCGCACGGCGCGGCCGCCAAACGCCGCGCCGACTGCTCAGCAAGAAAAGGTTTTGAAAGGATTCCACC
DNA Sequence for Gene
>NZ35_RS05340
ATGCGCAAAGCGCTAGCTCTCCCGCTGCTCGCCATTTTCCTCGGCGGCTGCGCCAGCAACCCTGCCGACCGTGACATCAGCGGCACCTGGATCAATCAGG TGGCGATCGATGCCGCAGCCAAGGGCGGCCCCCTGCGCGAAGCGCTTCAGGCCTACGGCCCGAACCTTGAGTGGGACGTCAACACCAAGGCCAGTCAGGC CCGCTACACCAACGGTTTTGAAAACGTCGAAGGACGGCTGTTGGGCGAACAGTCCGGCGCCTGGAAAGTCGACTTCTATGGCAGCTCCGCTAGCGAGCTG AAACGCGACGGCGGGCAACTGCAGCAAGCCGCCAGCGAGAACGAACCGGAGCAGGTTTTCGACCGCGCACAGATTCCGGTGCCGGAAGGCGCGCCGATCG GTGCCAGTTTCGAACGCGCGCTGTATTCCGCCTACATGGGCGGCAGCTGGACAATCGCCAGTGGTCAGGGCGAAGGCAGCACCGTGCAGTTCCAGGCTGA TGGCCAGGTTTCCGGTTTGCCGGGGGCCGACCGTTATGCCTTGTGCCTGGCAGGTGATTGCGCTTCGATGAGCAGCACCAACGACAACATGTGGTTGCAG CTCAACGGTCAGGGCAATGCCTACATCTTTGCGCGCAAGGGCAAGGAGCTGGAGATTTTCCAGGCGGTGAACACCGCGCTGGCAGATGAAATGCCGCAAT ACACGCCGGGCGAGCGCAAGTGGTTGCTGGAGAAGCAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCCGCTTCTGAAACCACTGAAGATCAAATGTGGGAGCGAGCCTGCTCGCGAAAGCAGTGTGTCAGTCAAAGTAATATTGCCTGATACACCGCTTTCGCGA GCAGGCTCGCTCCCACAGTTGTTTGGTGTTGTTAAAAAGTCAGCATTTACCTTCGAGGATCGCGGCATAGCCTTCGCGGTAGCTTGGGTACATTGGCGTC CAGCCCAACGCTTTAGCCCGGGCATTGCTGCAACGCTTGCTGCCCGTGCGCCGTACGCTGGCGTCGTCCGCCCACTCGGTAACGCCCAGATACTCACGCA ACCAGCCTACGACTTCCGCCAATGGCGCCGGTGCATCGTCGACACCGATGTAGAAATCCTCAAGCTTCACGCCCTGCCGAGCCTTCTCCAACAGAAACGC CAGCAACCCTGCCGCGTCGTCAGCATGAATCCGGTTACCATACAGCGGCGGATCAACCGCCACGCGATAACCGCGGCGCACTTGAGTCAGCAGCCACTCG
Amino Acid Sequence
>lipoprotein
MRKALALPLLAIFLGGCASNPADRDISGTWINQVAIDAAAKGGPLREALQAYGPNLEWDVNTKASQARYTNGFENVEGRLLGEQSGAWKVDFYGSSASEL KRDGGQLQQAASENEPEQVFDRAQIPVPEGAPIGASFERALYSAYMGGSWTIASGQGEGSTVQFQADGQVSGLPGADRYALCLAGDCASMSSTNDNMWLQ LNGQGNAYIFARKGKELEIFQAVNTALADEMPQYTPGERKWLLEKQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site