Pseudomonas chlororaphis EA105, NZ35_RS04150
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas chlororaphis strain EA105 contig_2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AAATTGATTCGCAAAGGCGACGGTAGAGCCCTCTTATGGAACAGCAGTCCAGCGCCTTGAAGGTCATGGTCATCGACGACTCGAAAACGATTCGTCGCAC CGCCGAAACCTTGTTGAAGAATGTCGGGTGCGAAGTGATCACGGCGATCGACGGTTTCGACGCCCTGGCCAAGATCGCCGACAACCATCCCGGGATCATT TTTGTCGACATCATGATGCCGCGTCTGGATGGTTATCAGACCTGCGCTTTAATCAAGAACAACAGTGCGTTCAAGGCCACGCCGGTGATCATGCTGTCAT CGCGTGACGGGCTGTTCGACAAGGCCAAGGGGCGGATTGTCGGTTCTGATCAATTTTTGACCAAGCCTTTCAGCAAGGAAGAGCTGCTCAACGCGATCCA GGCCCATGTTCCGGGCTTCGCCGCCGTTTTGCCGCAGTAAGACACGTACAGTGACGCTCGGTCAGTGGGCCGGGGGTCGACAAGAAAAATGGGGAAAACC
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| DNA Sequence for Gene |
>NZ35_RS04150
ATGGCACGTATCCTGATCGTCGATGATTCGCCGACTGAAATGTACAAACTCACCGGCATGCTCGAAAAGCACGGCCATGAAGTGCTCAAGGCCGAAAACG GCGCCGACGGCGTGGCCCTGGCCCGTCAGGAAAAACCCGACGCGGTATTGATGGACATCGTCATGCCCGGCCTCAACGGTTTTCAGGCCACCCGCCAGCT GACCAAGGATGCCGACACCAGCCACATCCCGGTGATCATCATCACCACCAAGGATCAGGAAACCGACAAGGTCTGGGGCACTCGCCAGGGCGCCAAGGAC TACCTGACCAAACCGGTCGACGAAGACACCCTGATCAAGACCCTGAACAACGTGCTGAACGGTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCGCGCAACCATGAGCGAATCGCTGACCGCGTTCGAACTGCTCTGGCAAATCGACCAGCGCTGCCGCTTGCTGGCGGCGGATCTGCCGTCGCAACCGGCG CGTCAGGATCGCTGGAGCGGCATCGGCTTTCGCCTCGGCGAGCATTGGTATGTGGCGCCGATGGGCGAAGTCAGCGAAGTGCTGCACGAACCGCGCTTCA CTCAGTTGCCCGGGGTCAAGCCGTGGGTCAAAGGCGTGGCTAACCTGCGCGGGCGGCTGTTGCCGATCATGGATTTGTGCGGATTTTTCGGTCATGAACT GTCGCCGCTGCGTAAACAGCGGCGGGTATTGGTGGTCGAGCATGGCGATGTGTTTGCCGGGTTGATGGTCGATGAGGTTATTGGCTTGCAACATTTCGAG CAGGACAGCTTCGAACCGATCTCGATCAGCAAGCGCCAGGGCTCGAAGGCCGAGTTCGTCAAAGGCTATTTTCGGCGCGAGCAGAACTGGCGAGTGTTCA
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| Amino Acid Sequence |
>chemotaxis protein CheY
MARILIVDDSPTEMYKLTGMLEKHGHEVLKAENGADGVALARQEKPDAVLMDIVMPGLNGFQATRQLTKDADTSHIPVIIITTKDQETDKVWGTRQGAKD YLTKPVDEDTLIKTLNNVLNG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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