Pseudomonas chlororaphis EA105, NZ35_RS18660

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis strain EA105 contig_19, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ACCGCCCAACCGTAATCGGCCGGGTAGATATCACTGGTCAGACGTTCTTCATAACCATGCAATTGGTCCGGGCCGCAAAAATGCATCTTGCCCGACAACG CGGTGCGATAGCCGAGGCGGCGTAGATAGTGAGCGTAGGTGGGAACATCGGCGGGGAATTCCGCCGCATTGTCGTAGGCGCCGATTTTGCTCGGCAACTG GCCGCTGACCAGGGTGAAACGCGAGGGCGCGCACAACGGGCTGTTGCAGTAAGCGGCGTCGAACACCACGCCTTGGGCGGCGAGGCGGGAAAGATTCGGC AGTTTGATCGGCGAAGGGCCGTAGAACGGCAACATTGGCGCGGCCATCTGATCGGCCATGATGAAAAGAATATTCTTGCGCTTCATGTGATCGCGGCATT CCATAGTGAATATTTATGCGACATTGCTGCGATCGAGCATGGAGTCCATGCTGTATCCGGTAAAGCCCGCGCCGGACAATGACTAGGATAAGCACAGCTT
DNA Sequence for Gene
>NZ35_RS18660
ATGTATGAAGCCTTGGGTGATCTGTCGCTCGACCTGCTCCGCGCGTTCGAAGCGGCGGCTCGGCAGCGCAGTTTTACTGCGGCCGCGGTTGAGCTTGGCA CCACGCAACCGGCGATCAGCCAGCAGATCAAACGGCTGGAAGAACAGCTCGGCACGCGGCTGTTTGACCGAATCTATCGAGGCATCGAACTGACGGAAGT CGGCGTGATCCTGTTCGAGCAAGTTGCCTTGGGTTTGCAGAATATCGACGCAGGATTGAGTGCTATCAGCGCACAACAGCAACATGAGGTGCTGCAGGTC GCTACCGATTTCGCCTTCGCCGCGTATTGGCTGATGCCGCGCCTGCATCGCTTTCACGAAGCCAATCCGCAGGTCGACGTCAGCCTCGTAACCAGCGAGC GCAACCACAACATGCTGCGCACCGATATTGATGTGGCGATCCTGTTTGGCGATGGGCGCTTTAAACAGGGCGAAAGCCATTGGCTGTTCAGCGAAGAAGT ATTCCCGGTGTGCAGTCCTCAGTTGCTCAAGGATCGCGCCCTGCCCTTGCCTGCTCAGGCGTTGCTGGAGTTTCCACTGCTGCATTTGCGCGGGGAAAAC AGCAGCAACTGGTTTGACTGGAGTGGTCTGTTCCGCGAGTTGGGCATCACCACGCCACCAGCGCCGGGGCAATTGCGCTTCGACAATTACACGCTGTTGA TCCAAGCGGCGATAGGCGGCCAAGGCGTGGCGATTGGCTGGCGGCACCTTGTGGATAACTTGCTTAGTCAGGGTTTGCTGTGCCGGCCGATTGCTGAAAC GACGCTGTCGCGGCTCGGTTATTACGTGGTGCTACCGCAGCGCAAACGGCGCGGGGCGTTGATTCAGCAGTTTGTCGATTGGTTGATGGCGGAACAGGCG AGCAGCGCGCAATCCTTGAGTGGGCTGGCGCTGCCTTTAATTGCGGTTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AGGTTTACGAATCTGAAGCTGCCACAAAATTCACATGCTGCCCCACATGCAAATTCAGCCTTAGCTCATCGGCAATCCCCACCGCCACGCGATTCAAGCG CTCCAGGGGTTCGGCCAGACCCGGTTCGAGATTGCCGCCAACCTGACTGAAATGCTCAATGGTCAGCCCGGCCACACCGTGCGGCGCATTCACCAGCGTC CAGTGCAACGGGCTGCTTTGCACGGCTTCGCGAATTTCTTCGGCAGCATGACGTTGCAGGCGATCATCAACATCCGGCTCATCAAGTACGGCAAAGTCAC CCACCAGAAACAGCCGCGACACATTGGCCGCTTGCAGGCCATCGACCAGTGCGTCGACGGCCAGTACTTGCTCGACCGGTCCGAGCACTACGGAGCGTTC AACCTGATCGCTGCTGAACGGTAACCCCGGCGCATCCAGTAAACAGATGACCGCCGAACTGCCGGCCACACTCTGATTGACCCGTTCCGAGTCGAACAGA
Amino Acid Sequence
>LysR family transcriptional regulator
MYEALGDLSLDLLRAFEAAARQRSFTAAAVELGTTQPAISQQIKRLEEQLGTRLFDRIYRGIELTEVGVILFEQVALGLQNIDAGLSAISAQQQHEVLQV ATDFAFAAYWLMPRLHRFHEANPQVDVSLVTSERNHNMLRTDIDVAILFGDGRFKQGESHWLFSEEVFPVCSPQLLKDRALPLPAQALLEFPLLHLRGEN SSNWFDWSGLFRELGITTPPAPGQLRFDNYTLLIQAAIGGQGVAIGWRHLVDNLLSQGLLCRPIAETTLSRLGYYVVLPQRKRRGALIQQFVDWLMAEQA SSAQSLSGLALPLIAV
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site