Pseudomonas chlororaphis EA105, NZ35_RS17090

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis strain EA105 contig_16, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GTCTTTGTCCTAGACATGGGCGAGCCAGTGCGGATCGTCGAGTTGGCGGAAAAAATGATCCACCTATCCGGTTTGAGCATCCGTTCTGAGCGCAATCCGC AGGGCGACATTTCCATCGAGTTCACCGGCTTGCGCCCAGGTGAAAAACTCTATGAGGAATTGCTGATCGGGGATAACGTCGCAGCTACGTCGCATCCGAT GATCATGAGCGCCAATGAAGATTTCCTTCCCTGGGATGCCCTGAAAGCTCGCTTGAACGAGCTGCTCAAAGCCGTGGAAGCCGACGACTACACCCGAGTC CGCCAACTCCTGCGCGAAACCGTCTCCGGCTACACCCCCGACGGTGAGATCGTTGACTGGATCTACCAGCAACGTCGTCTCGAGCCCTGATTGTTTCACA TCCTGTAACGCTCGCATTTTTGACTTACCGCCATCATGACCTACGTTTGGAGAGCAGCTTCGGAAAAGCTGCTTTCTAAAACGATGATGGAGCGTCACTT
DNA Sequence for Gene
>NZ35_RS17090
ATGCGTACCGGTTATTTCTATTCGCTGATTTTTGCTTTCCTCACCAGCGCCTCGATCGCTGCAATTGCTGCCCCTGTAGAGCCTTCGGAGACAACGAAGG CGCCTCTGATGATGGATGCCTCGGCGTCGCCTTCGCAGACTGCCAAGGTAGATCTCAACGGCGCAGATGCGACGACGTTGCAGAAGGAGTTGGCAGGTGT AGGGGAAGCGAAGGCGCAGGCGATTGTTGCATATCGGGATGCAAACGGGCCGTTCGCTTCGGTGGATGAGTTGCTGGAAGTGAAGGGGATTGGCAAGGCG ATTCTGGATCGCAACCGTGAAAAGCTGGAAGTGAACTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCTGACAGTTTCATTGCCGAGAGGCCGGTCATTGACCGGCCTTTTTATTGGGCGTCGATCGTGTGGATACTTGAAAGCTGAAAATTACGGCTATCATATT GTGTATTGATTATGCCTATAATAAATTTTTGCTTGGGACTGATTCAGCAGCCGAATCACAGCACACCATTGCACGTCGAATTTTGAATTGATAAGGGGTA ACCACGGTATGAACCAACGTCGAGTCGTCGTAACGGGCATGGGCCTGGTTTCACCCTTGGGCAGTAATGTTGAAATTGTCTGGCAGCGTTTGCTCGCTGG TCGTTCCGGGTTGCGCAACCTGCCAGATGCGGTTGTGGCGGATCTGCCGACGCGGGTTGGCGGCAGTGTACCGACGGTGGAGGAGGACGCCGAGGCCGGG TTTGATCCGGATCGCGCGACGCCGCCTAAAGAACAGAAGAAGATGGATCGCTTCATCATGTTCGCCATGGAAGCGGCGCGGCAGGCGCTGGAGCAGGCCG
Amino Acid Sequence
>competence protein ComEA
MRTGYFYSLIFAFLTSASIAAIAAPVEPSETTKAPLMMDASASPSQTAKVDLNGADATTLQKELAGVGEAKAQAIVAYRDANGPFASVDELLEVKGIGKA ILDRNREKLEVN
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site