Pseudomonas chlororaphis EA105, NZ35_RS16305
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas chlororaphis strain EA105 contig_15, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GAAGCTTTCATCGACAACACGCCGCAATTGAGTCTGGCACCGCATGCCCATCAAGTCGGGCTGATCGTGTTGCGTTCGTTCGGCAAGTTTTTCGGCCTGG CCGGTGTGCGTCTGGGCTTTGTGCTGGCGGAACGCAAGTTGCTCCGACTGCTCGCGGAACAGGTCGGGCCGTGGGTCGTCAGCGGGCCGACGCGGGTGCT GGGGCAGGCTTGCCTGCAAGACACCGAAGGGCATACGCGACAACGGATTCGCAGTGATGAAGCGAGCGAACGGCTGGCGGCGTTGCTTGAGCGCTACGGC TTCAAACCGCAGGGTGGCTGCGCATTGTTTCAGTGGCTGATCACCGATCAAGCGCCAGCGTTATACGAATTCATGGCCCGGCGCGGCATTCTTCTGCGCA TCTTTACCCACAACAGCAGTCTGCGTTTTGGCTTGCCCGCCGATGCGGCTGAAGAGGCGCGTCTCGAACACGCTTTAATCGCCTTCACCAAGGACAACTC
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| DNA Sequence for Gene |
>NZ35_RS16305
ATGACCACGCTGATGGTGCAGGGCACCACTTCCGATGCCGGTAAAAGTACGCTGGTGACGGCGCTGTGCCGTTGGGCGACCCGGCAGGGCGTGGCGGTCG TACCGTTCAAGCCGCAGAACATGGCGCTCAACAGCGCAGTGACTGCCGATGGCGGTGAGATCGGCCGCGCGCAAGCCGTGCAGGCGCAAGCGGCATTTCT TGATCCGCACACCGACATGAACCCGGTACTGCTCAAGCCCAACAGCGACACCGGCGCGCAAGTGATCATTCATGGTCGCGCGGTGACGTCGATGAATGCC GTGGCGTATCACGACTACAAAGCCATCGCGATGCAGGCCGTGCTGGCCTCGCATGACCGTCTCAGTGCGGCGTATCCGCTGGTCATGGTCGAGGGCGCAG GCTCGCCCGCCGAGATCAATCTGCGCGCTGGTGACATCGCCAACATGGGCTTCGCCGAAGCGGTGGATTGCCCGGTTTTGCTGATCGCGGACATCAATCG CGGCGGGGTTTTCGCGCATCTGGTCGGCACGCTGGAGCTGCTGTCGCCGAGCGAACAGGCGCGAGTCAAAGGTTTCATCATCAACCGTTTTCGCGGCGAC ATCGCCTTGTTGCAACCGGGCCTCGACTGGCTCGAACAGCGCACCGGCAAACCGGTGGTGGGCGTGTTGCCCTACGTGATGGATCTGCATCTGGAGGCCG AGGACGGCATCGATCAGCGCCAGACCGACAAGGCCGAACAAGTCTTGAAAGTGGTAGTGCCGGTGCTGCCGCGCATCAGCAATCACACCGATTTCGATCC ACTGCGCCTGCATCCTCAGGTCGATCTGCAATTTGTCGGGCCAGGGCAGGCGATTCCTGCTGCCGACCTGATCATCCTGCCGGGGTCGAAGAGTGTGCGT AGCGATCTGGCGTATTTGCGTGCCAATGGTTGGGACACAGCAATCAATCGGCATTTGCGCTACGGCGGCAAGGTGCTGGGGATCTGCGGCGGTCTGCAGA TGCTCGGCGAGCAGGTGCATGACCCGCTCGGTCTTGAAGGTGCGGCGGGCACGAGTGCCGGTTTGGGCTTGCTGGCGTTCGAAACCACGCTTGAGGCCGA GAAGCAGTTGCGCAATGTGCGCGGGCGGCTGGCGCTGGAAGATGCTGAGGTCAGCGGCTATGAAATTCATGCCGGCGTCACGACCGGCGCGGCGCTGGAG AATGCGGCGGTGCATCTGGACGACGGTCGTTGTGATGGCGCTCAGAGTGCCGATGGACAAGTGTTCGGCACGTATCTGCATGGCTTGTTCGAATCGCCGG CGGCGAGTGCGGCGTTGTTGCGCTGGGCCGGGTTAAGCGATGTGCAGGAGGTGGATTACCACGGCTTGCGCGAGCGCGATATCGAGCGCTTGGCGGATCT GGTGGAGCAGCATCTGGATACTGATCTGTTGCGTCGGCTCTGTGGGATTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ATTGCCTGTGCGCGCCTCTTCGCGAGCAGGCTCGCTCCCACGATGGACCCGTTGGTCTTAGATTCTGTTTACACCCCATAACCCTGTGGGAGCGAGCTTG CTCGCGAAGGGGCCAACTGTTTCAACACATAATTCTGTGGATAAACCCATGCTCCAACTGATCCTCGGCGGCGCCCGCTCCGGCAAAAGCCGCCTGGCGG AAAAACTCGCCACCGACAGCCATCTATCGGTCACCTACATCGCCACCAGCCAACCTCTTGATGGCGAGATGAGCGACCGCGTCGCCCATCACCGCGCGCG CCGTCCCGCCGAGTGGTCTCTCATCGAAGAGCCTCTAGAGCTGGCCCGCGTCCTGCGCGAATCCGCCAGCGCCGAGCGATGCCTGCTGGTTGATTGCCTG ACCTTGTGGCTGACCAATCTGCTGATGCTCGATGACGCCGAACGCCTCACCGCCGAGCGCGAAGCCTTGCTCGAATGCCTGGCCTCGCTGCCGGGAGAAA
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| Amino Acid Sequence |
>cobyric acid synthase
MTTLMVQGTTSDAGKSTLVTALCRWATRQGVAVVPFKPQNMALNSAVTADGGEIGRAQAVQAQAAFLDPHTDMNPVLLKPNSDTGAQVIIHGRAVTSMNA VAYHDYKAIAMQAVLASHDRLSAAYPLVMVEGAGSPAEINLRAGDIANMGFAEAVDCPVLLIADINRGGVFAHLVGTLELLSPSEQARVKGFIINRFRGD IALLQPGLDWLEQRTGKPVVGVLPYVMDLHLEAEDGIDQRQTDKAEQVLKVVVPVLPRISNHTDFDPLRLHPQVDLQFVGPGQAIPAADLIILPGSKSVR SDLAYLRANGWDTAINRHLRYGGKVLGICGGLQMLGEQVHDPLGLEGAAGTSAGLGLLAFETTLEAEKQLRNVRGRLALEDAEVSGYEIHAGVTTGAALE NAAVHLDDGRCDGAQSADGQVFGTYLHGLFESPAASAALLRWAGLSDVQEVDYHGLRERDIERLADLVEQHLDTDLLRRLCGI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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