Pseudomonas chlororaphis EA105, NZ35_RS16285
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas chlororaphis strain EA105 contig_15, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTGGTGTTGACCGGCAATGGCAAAGGCAAAAGCAGCTCGGCCTTCGGCATGCTTGCCCGCGCCATGGGCCACGGCATGCAGTGCGGCGTGGTGCAGTTCA TCAAGGGTCGCAACAGCACCGGCGAAGAGCTGTTTTTCCGCCGCTTCCCTGAGCAAGTGCGCTTTCATGTGATGGGCGAGGGCTTCACCTGGGAAACCCA AGATCGTCAGCGCGACATCGCCGCCGCCGAAGCTGCGTGGGCTGTGTCCCGCGAACTGCTGCGCGATCCGTCGATCGGTCTGGTGGTGCTCGACGAACTC AACATCGCCCTCAAGCACGGCTACCTCGATCTCGATCAGGTGCTCAGCGATTTGCAGGCGCGTCCGCCGATGCAGCATGTGATCGTCACCGGTCGCGCGG CCAAGCCGGAAATGATCGAAATGGGCGACACCGTGACTGAAATGGGCATGCTCAAACATGCCTTCCAGGCGGGCATCAAAGCGCAGAAAGGCGTCGAACT
|
|
| DNA Sequence for Gene |
>NZ35_RS16285
TTGAATCAACCACGTCACTGCCCGGCGGTCCTTATCGCCGCGCCGGCCTCCGGTCAGGGCAAGACCACCGTCACCGCCGCACTGGCCCGTTTGCATCGCA ATCAGGGGCGCAAAGTGCGCGTGTTCAAATGCGGCCCGGATTTTCTTGACCCGATGATTCTCGAGCGCGCCAGCGGTGCGCCGGTGTATCAATTGGATAT GTGGATGGTCGGCGAACAGGAAAGTCGTCGTCTGTTGTGGGAAGCCGCCGCCGAGGCGGATTTGATTCTGATCGAAGGCGTAATGGGCCTGTTCGATGGC ACGCCCTCCAGCGCCGATCTGGCGCGGCATTTTGGTGTGCCGGTGCTCGGCGTGATCGACGGCACAGCCATGGCGCAGACCTTCGGCGCGTTGGCGCTGG GCCTGGCCAAGTATCAGCCGGACCTGCCGTTTGCCGGCGTGTTGGCCAATCGTGTCGGCACCTTGCGCCATGCGCAATTGCTCGAAGGCAGCCTCACCGA AGGCCTGCGTTGGTATGGCGCATTGTCCCGTGAGACGGGCATTGAGTTGCCAAGTCGTCATCTCGGCCTTGTCCAGGCCAGCGAACTGAATGATCTGGAT GTGCGTCTCGACGCCGCCGCCGATGCATTGGCCAGCAGTTGCGAGGTAGCGCTGCCACCGGCCGTGGAATTCGCCGCGCCTGATGTGATCGCCGTCGAAC CGTTGCTGAAAAACGTGCGAATTGCCGTCGCCCGCGATGAAGCGTTTGCCTTCACCTACGGCGCGAGTCTCGATCTGCTGCGGGCGATGGGCGCCGAGTT GAGCTTCTTCTCGCCGATCCGTGACACGCAATTGCCTGACGCTGACAGTCTGTATCTGCCCGGTGGTTATCCGGAATTGCACCACGTTGCGTTGTCGCAG AACACCGCGATGCTGGAGGCGATTCGTGCACATCATGCGGCGGGCAAACCTCTGCTCGCTGAATGTGGCGGCATGTTGTATCTGCTCGATTCGCTGACTG ACGTTGAAGGCACTCGCGCCGAACTGGTCGGCCTGCTCAAGGGCGATGCGGTGATGCAGAAGCGTCTGGCTGCACTGGCATTGCAGGCAGTGGATCTGCC GGAAGGTTCGCTGCGTGGCCACACTTATCACCACTCCCTGACGACGACTGAGTTGACGCCGATTGCCCGTGGCTTGAGTCCGAATGGTGGGCGTGGGGCG GAGGCGGTTTATCGGGAAGGGCGGATGACGGCTTCTTATGTGCACTTCTATTTCCCGTCGAATCCTGCGGCTGTCGCAGCATTGTTTGCACCTGGCCTCC AGGCCGCCATCGCTGGCAAGCCAGCTCCCACAGTGGACGGTGAGCTTCCTGAAGAAATGCAATCCCCTGTGGGAGCTGGCTTGCCAGCGATGGGGCCATG A
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CCGACAACTCATTTACCGAAGCCGAACGCCAAGCGGTTTATAGAGCCATCGCCGAACGCCGCGACATGCGCCACTTCACTGGCGGCACCGTCGAACCAGA ACTGCTGCGCCGCCTGCTTGAAGCCGCCCACCAGGCCCCAAGCGTCGGCCTGATGCAGCCCTGGCGCTTCATTCGCATCAGCGACCGTACCCTGCGCGGC GAGATCCAGAATCTCGTGGAAGAGGAACGCATCCGCACCGCAGAAGCCCTCGGCGAGCGCAGTGACGAGTTCATGAGGCTCAAGGTCGAAGGCATCCATG ACTGCGCCGAGGTGCTGGTCGCCGCGTTAATGGACGATCGCGAAAAACACATCTTCGGTCGCCGCACGCTGCCGGAAATGGACATGGCCTCGTTGTCCTG CGCGATCCAGAACCTGTGGCTGGCCGCGCGCGCCGAAGGCCTGGGCATGGGCTGGGTTTCGCTGTTCGAGCCACAGGCACTGGCGGATTTGCTGAAATTG
|
|
| Amino Acid Sequence |
>cobyrinic acid a,c-diamide synthase
MNQPRHCPAVLIAAPASGQGKTTVTAALARLHRNQGRKVRVFKCGPDFLDPMILERASGAPVYQLDMWMVGEQESRRLLWEAAAEADLILIEGVMGLFDG TPSSADLARHFGVPVLGVIDGTAMAQTFGALALGLAKYQPDLPFAGVLANRVGTLRHAQLLEGSLTEGLRWYGALSRETGIELPSRHLGLVQASELNDLD VRLDAAADALASSCEVALPPAVEFAAPDVIAVEPLLKNVRIAVARDEAFAFTYGASLDLLRAMGAELSFFSPIRDTQLPDADSLYLPGGYPELHHVALSQ NTAMLEAIRAHHAAGKPLLAECGGMLYLLDSLTDVEGTRAELVGLLKGDAVMQKRLAALALQAVDLPEGSLRGHTYHHSLTTTELTPIARGLSPNGGRGA EAVYREGRMTASYVHFYFPSNPAAVAALFAPGLQAAIAGKPAPTVDGELPEEMQSPVGAGLPAMGP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|