Strain | Pseudomonas chlororaphis strain EA105 contig_15, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GTTCATCGCGTTCTCAATCGCTCATTATTCTCGTTTGCCTGCCGACAACCTGCCCAATATCCATTTGGAAACAGGTGTCGCGATGCGCAAGGGTCCGTTG TGTCTGATGTTGGTCACGTTGTCGATCATGGCACCCGCCCATGGTGAGGAAACCACCGAAGGCGGCAGCTCCACGCCATTGTCGTTAAGCGCCGGCAGCC AGATCACCGAGTTGCAGCAGCGCCTCAAGGCCAGCGAGCAGCAGCGGGAAGAACTGAGCAAACAACTGCAAAATGCCGACAATACCCGCGAAAGCGCCCA GCTTGCCCGGTTGCGCCAAGAGAACCAGCGCCTCAAGCTGCAACTCAAGGAAGCCCAGGCCAGCCCGTTGCCGCGGCTGTTGACCGATCAGCAGCAGTGG TTCGTCACGGGAGCCGGAGTAGCGCTATTGGCGCTGCTCTGCGGTATCTTTGCCAGTGGAGCAAGCCGAAAACGTCGGCAATGGCTAAATTGAGTGAGTC
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DNA Sequence for Gene |
>NZ35_RS15470
ATGAGCGAGCTGTTACTGATTGATGATGACCAGGAGTTGTGCGAACTCCTGAGTAGCTGGCTGAGCCAGGAAGGCTTCCACGTACGTGCCTGCCATGATG GACAGAGCGCGCGCAAGGCACTGGCTGAAACTGCGCCGGCGGCCGTGGTGCTGGACGTGATGCTGCCCGACGGCAGCGGTCTGGAACTGCTCAAGCAACT GCGCAACGATCACGCTGATCTGCCGGTGCTGATGCTGTCGGCCCGCGGCGAGCCGCTGGACCGCATTCTCGGCCTGGAGTTGGGCGCCGACGATTATCTG GCCAAACCGTGCGACCCGCGCGAACTGACCGCCCGCCTGCGCGCGGTGTTGCGCCGCAGTCACCCGGCGGCGGTGTCGACGCAGCTTGAACTGGGCGACC TGAGTTTCAGCCCGGTGCGCGGCGTCGTCAGCATCGATGAGAAAGAACTGACCCTCACCGTTTCCGAAAGCCGTCTGCTCGAAGCGCTGCTCAAGCAGCC CGGCGAGCCGCTGGACAAACAGGAACTGGCGCAGCTCGCCCTCGGCCGCAAGCTGACCCTGTACGACCGCAGCCTCGACATGCACGTCAGCAACCTGCGC AAGAAGATCGGCCCGCATCCCGACGGCCGCCCGCGCATCGTCGCGCTGCGCAGCCGTGGTTACTTCTATAGCCTGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GTTTTGTCAGGTCAGCGCTCGAGCGTCTTTACCCAAGCTTTACGCAGTGCTGACCGCCGCTGACCTTGATCTCCGTAATCTGTACTCATCCGGAACGTAC CGGGAACGAGACAAGGAGATACACCATGCGCAAGACTCTTATCGCTCTGATGTTCGCTGCCGCTCTGCCAACCGTCGCCATGGCCATGCCGCAAGACGGC GGCCCGATGGGTGGCCCGCTTGACGGCCCACGCCACGGCGGTCAGATGCACGGCATGCACGGCAAAGGCCCGTACAGCCAACTCGACCTGTCCCGCGAAC AGCGCGAGCAGATCCGCAAGATCATGGGCGAGCAGATGCACGAGCGTAAGCAAGTGGTCGACAAGTACCTGGAAAAACTCTCGCCGGCTGACCAGAAAGC CATGAAGGACGAGATGGCGGCCAACCACAAGAAAGCCGAGACCGATGTCCGCGCCGTGTTGAAACCGGATCAACAGAAGAAATTCGACGAGATCCAGAAG
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Amino Acid Sequence |
>chemotaxis protein CheY
MSELLLIDDDQELCELLSSWLSQEGFHVRACHDGQSARKALAETAPAAVVLDVMLPDGSGLELLKQLRNDHADLPVLMLSARGEPLDRILGLELGADDYL AKPCDPRELTARLRAVLRRSHPAAVSTQLELGDLSFSPVRGVVSIDEKELTLTVSESRLLEALLKQPGEPLDKQELAQLALGRKLTLYDRSLDMHVSNLR KKIGPHPDGRPRIVALRSRGYFYSL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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