Pseudomonas chlororaphis EA105, NZ35_RS15285

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis strain EA105 contig_15, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GAGAATAATGCAGCAAAGAGGTTGGTTATTCCCGGGGATATTTACCAAGCAATTGTCAAGTTATTCCTGTACGATGCCTGGCCGAGTTACTTTTCTACAG GTTAATGGCCGCCATGCGTGTAAAAGCATCCACCAGCAAAGCAAAGCCAGCTCCAGCCGTTGAAACCAGCGAATCGATCAACGATCAGATCGCAGCGTTC CTCAAGTCCGGCGGCGAGATTCAGCAAATTGCCAAAGGCGTCAGTGGCCAGACATTCGGCCCGTCCAAGCAGATCAGCCTGGGCAAGAAGTAATACCCGG TTTTACACCCGTCCAGAGGCGCTTTGAGCTTCGAAGCGTCTGGACTGGCACCGCGCAACATACCCTCCGCATTAAACAAAAATCCTTTTAAATCGACGAA CGGCCTTCAATGCCGAGCATTCGCCGGTATTCTTGCACGCGTCTAGATCAAGCGTTTCAGCAGGCCCGCCGCCCTGCCCTCGCTGTTCATGGAGTGACGC
DNA Sequence for Gene
>NZ35_RS15285
ATGCGCAAAACATCCTGTTTATTACTCGTAGGCCTATTGGCCAGTGCGACCGCGCACGCGCAGATTTTCCAGCGTGAACTCGGCGACTTCGACCTCAAAC TCGGCACCACGCCCACACGTAGCATGGCCCAGGGCCTGGTCAAACCGGCGGCAGTCGGCTCATTCCACGGCGGCCTCGACCTGAGCCACGACAGCGGCCT CTATGTCGGCCAGTACGCACCGAGTATGGGCATCTCCCCGGGCAAGAACCTCGAAATCGATTCCTATGTCGGCTTTAAACAACCTTTCGATCAGACCCTT GGCTACGAAGTCGGGATGATCCACTACAGCTATCCCAAGGTAGACACCCTCGACAGCCAGGAGCTGTTCGGTGGCCTGACCCTGCTCGGCAGTCGTTTCG GCGTGGCCTTCAGCAACGACCCGGACAAACAGAACAACACGTTGTTTGCCGATCTCGGCGGCAACCAGCCATTCGGCATCGGCGTCAGCATGAAATACAC CACCCACCAACTGAACACGCCCGTCGCCGTGGACGGTGGTTATGTCAGCAGTTTTACCGACTGGTCGGTGAAATTGTCCCGGCCGTTCATGGGCGTCGAT CTCGATCTGATCTACAGCAATTCCAGCCTCAGCGGCAGCGATTGCTCAGCCTATTCCGGGCACAACAGCGAATGTGACGGCCTCGTCACCCTCAAGGCTG CGCGTGCGTTCTATTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCGGCTGAACTGCCGGGTTCATTCTGCGTTCACATAGGAATCAGTCCCTCGAAGCCAGGCTCACGCAAGGATTCGCCCATGTCTCGCTGGTTCAAGCACA TCGCCGCACTACTGATTTTCACCCTCGCCCTCGGCGCTTGCAGTCGCGTCGGCCTGGCCTATCGCAATCTCGACGTCATTATTCCGTGGACGCTCGGTGA TTACCTGGACATGAACGGCGAGCAGAAAGACTGGTTCAACGAACGCCTCAAGGACCACCTGAGCTGGCATTGCACCACGCAATTGCCGGGTTATCTGGAC TGGCTTGATCGCCTGCAGACCATGGTCGAAACCAATCAGGTCACCGATGCCGCGTTACAGGCGCGCACGACGGAAGCCAAGCAGGCCATTGCCGAAACCG CTCGAGAGATCACCCCTTCGGCCATTGAGCTGTTGCAAGGTCTGGATGACAAGCAAGTGGCCGAGATGAATGACGCGTTTGCCAAGGATCTGCGCAAGCG
Amino Acid Sequence
>lipoprotein
MRKTSCLLLVGLLASATAHAQIFQRELGDFDLKLGTTPTRSMAQGLVKPAAVGSFHGGLDLSHDSGLYVGQYAPSMGISPGKNLEIDSYVGFKQPFDQTL GYEVGMIHYSYPKVDTLDSQELFGGLTLLGSRFGVAFSNDPDKQNNTLFADLGGNQPFGIGVSMKYTTHQLNTPVAVDGGYVSSFTDWSVKLSRPFMGVD LDLIYSNSSLSGSDCSAYSGHNSECDGLVTLKAARAFY
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site