Pseudomonas chlororaphis EA105, NZ35_RS14105

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis strain EA105 contig_12, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GACGGTGTGGGAACTGGAAGGGCCGATGCCGATTTTGAACAGGTCGAAAACGCTGATAGCCATTGCTGCAGAGCTCCTGAGGATGCCGGTCCGGGACGCA AAAGCGCCCGCTGGCGGAGCTGCTACGCTCAAGCTGCGATCCGCCGGAATGCCCGCATCATCAGGCTTTTGTCCGGACGCACGGCGTCTGACACCGACGC ACTCATGTCCACCAGCGCCGCGCCGTTTTCGCCCCGGTTTTTCGCCGTTTTTGTACGGTTCAGATGGCCATTCGGGGCTGAAAAAAGCTGTAAGCGACGT CACTGACACTGGATGCGACCATCCCTGTACTGGATACGACCCCCCCTGTAGGCGTCAGATTTTCACTGGTACATGATCGTTATGACTCGATTGCAAGGCG CCGTGACAGAGCTGTCTCCAGAACGCCATCCAACCGCAACCTATAAGTGCGGTGGTCCACAGTCGGAACACTGCCAAAAAAAACACCAAGGAGTCCATCC
DNA Sequence for Gene
>NZ35_RS14105
ATGAAAGGTTCCCCGTCGTTGTTGTTGGCCGCCATGCTGAGTCTGCCGTTACTGGCGCAAGCTGCAGAACCGGCGCAGTGCAGTACCGTTAACTTCTCCG ATGTCGGCTGGACCGACATCACCGCCACCACCGCCACCACCTCCGTCGTCCTCAACGCCCTCGGCTACAAGACCAAGACCACCATGATCTCCGTGCCCGT GACCTACAAGTCGCTGGCCGACGGCAAGAACATGGACGTGTTCCTCGGCAACTGGATGCCGACCATGGAAAACGACATCAAGGCCTACCGCGACGCCGGC ACCGTGGAAACCGTGCGCACCAACCTCAAGGGCGCCAAGTACACCCTCGCCGTGCCGCAAGCCTTGTATGACAAAGGTCTGCATGACTTCGCCGACATCG CCAAATTCAAGAAAGAGCTCGACGGCAAGATCTATGGCATCGAGCCTGGCAACGACGGCAACCGTCTGATTCAGAGCATGATCGACAAGGACGCCTTCGG CCTGAAGACCGCCGGCTTCAAAGTCGTCGAATCATCGGAAGCGGGCATGCTCTCGCAGGTGGATCGCGCGCAAAAACGCGACACCGCGGTGGTCTTCCTC GGCTGGGCGCCACACCCGATGAACAAGCGCTTCAAGATTCAATACCTGACCGGTGGCGATGATTTCTTCGGCCCCGATTTCGGTGCGGCGACCGTGGCGA CCAACACCCGCAAAGGTTACGCCACGGAATGCAGCAACGTCGGTCAGTTGCTGAAGAACCTGGAGTTCACCGTCGACATGGAAAGCGAACTGATGGGCAA CATCCTCGACGACAAGATGAAGCCTGACGCGGCCGCCAAGGCCTGGCTGAAAAAGAATCCACAAGTGCTCGATACCTGGCTCGCTGGCGTGACCACCATT GACGGTAAACCTGGCCTGGAGGCCGTGAAAGCCAAGCTTCAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCGCTTATGCCGGACGGCTGCGGCCGTCCGGGCTGTTTATTTCCTTGCATGCGGACGTTCACTACCATGCTGATTGATCAGAAAATACCTTTAGGCCAGT ACATCGCGGGCTTCGTTGAATGGTTGACGCAACACGGCGCCAACACCTTCGACGCAATCGCCGTGACCCTGGAAACGATGATCCACGGCGTGACGTTTGC GCTGACCTGGTTCAACCCACTGGTCTTGATTGGCCTGATCGCCCTGCTCGCGCACCTGATCCAGCGCAAATGGGGATTGACCGCTTTCGTGATCGCCTCC TTCCTGCTGATCCTCAATCTGGGGTACTGGCAGGAGACCATGGAAACCCTCGCCCAGGTCATGTTCGCGACCCTGGTCTGCGTGGTCATCGGCGTGCCGT TGGGCATCGTCGCCGCGCACAAACCGATGTTCTACACTGTCATGCGTCCGGTACTCGATCTGATGCAGACCGTACCGACCTTCGTTTACCTCATTCCGAC
Amino Acid Sequence
>glycine/betaine ABC transporter substrate-binding protein
MKGSPSLLLAAMLSLPLLAQAAEPAQCSTVNFSDVGWTDITATTATTSVVLNALGYKTKTTMISVPVTYKSLADGKNMDVFLGNWMPTMENDIKAYRDAG TVETVRTNLKGAKYTLAVPQALYDKGLHDFADIAKFKKELDGKIYGIEPGNDGNRLIQSMIDKDAFGLKTAGFKVVESSEAGMLSQVDRAQKRDTAVVFL GWAPHPMNKRFKIQYLTGGDDFFGPDFGAATVATNTRKGYATECSNVGQLLKNLEFTVDMESELMGNILDDKMKPDAAAKAWLKKNPQVLDTWLAGVTTI DGKPGLEAVKAKLQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site