Pseudomonas chlororaphis EA105, NZ35_RS03050

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis strain EA105 contig_1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCGGTGAAAACTCGGCAGCAGTCAAACTGACCCTGGAAGACGGCAGCCAGTACAAGCTCGACGGTAAGCTGGAATTCTCCGAAGTCACGGTCGACCCGAC TACCGGTTCGGTGACCCTGCGTGCAGTGTTCCCGAACCCGGATCACACCCTGCTGCCAGGCATGTTCGTCCGCGCCCAGTTGCAGGCTGGTGTCAACGCC GCCGCCATTCTGGCACCGCAACAAGGCGTGACCCGCGACCTCAAAGGCACCCCGACCGCACTGGTCGTCGGCGCCGACAACAAGGTCGAACTGCGTCAGC TCAAGGCCAGCCGCACCGTCGGCAGCCAGTGGCTGATCGAAGACGGTCTCAAGGCTGGCGATCGTCTGATCACCGAAGGGCTGCAATACGTGCGCCCGGG TGTTCAGGTCAACCCGTCCGAAGCCACTAACGTAGGCACCAAGAACCCGGCCCCCGCTCAGGCAGCTGACAAAGCCGCCGGCGGCAAAGGGGAGTAATCC
DNA Sequence for Gene
>NZ35_RS03050
ATGTCAAAATTCTTCATCGACCGTCCGATTTTCGCCTGGGTAATTGCCCTGGTGATCATGCTGGTCGGGGCACTTTCGATCCTGAAATTGCCGATCAACC AGTACCCGAGCATTGCGCCGCCGGCCATTGCGATCTCCGTGACCTACCCGGGCGCTTCGGCGCAAACCGTGCAGGACACCGTGGTCCAGGTGATCGAGCA GCAGCTCAACGGTATCGACAACCTGCGTTATGTGTCCTCGGAAAGTAACTCCGACGGCAGCATGACCATCACCGCGACCTTCGAGCAAGGCACCAACTCC GACACCGCGCAGGTGCAGGTTCAGAACAAGCTGAACCTGGCCACCCCGCTGTTGCCGCAGGAAGTGCAGCAACAAGGTATCCGCGTGACCAAGGCAGTGA AAAACTTCCTCTTGGTCATCGGCGTGGTATCGCGTGACGGCAGCATGACCAAGGACGACCTGTCCAACTACATCGTGTCGAACATGCAGGATCCGATCTC GCGGACCGCCGGTGTCGGTGACTTCCAGGTCTTCGGTGCCCAGTACGCGATGCGCATCTGGCTCGATCCGGCCAAGCTGAACAAGTACAACCTGACCCCG GCTGACATCAGCTCCGCGATTTCGGCACAGAACGTCCAGGTGTCGTCCGGTCAGCTCGGCGGTTTGCCGGCGCTGCCAGGCCAGCAACTGAACGCGACGA TCATCGGCAAGACGCGTCTGCAGACCGCCGAGCAGTTCAAGGCGATTCTGCTCAAGGTCAATCAGGACGGCTCGCAAGTGCGCGTCGGCGACGTCGCCGA TGTCGGTCTGGGCGGTGAGAACTCGACCATTTCGGCACAGTTCAACGGCAAACCGTCTTCCGGTCTGGCGGTAAAACTGGCCAACGGCGCCAACGCCCTC GACACCGCCAAAGCCCTGCGCAAGACGATTGACGAGCTCAAGCCGTTCTTCCCGCAAGGCATGGAAGTGGTGTTCCCGTACGACACCACCCCGGTGGTAA CCGAATCGATCAAAGGTGTAGTTGAAACCCTGGTCGAAGCGATCGTGCTGGTGTTCCTGGTGATGTTCCTGTTCCTGCAGAACTTCCGCGCCACCGTCAT CACCACGATGACCGTGCCGGTGGTACTGCTGGGTACGTTCGGCATCCTCGCGGCATTCGGTTTCAGCATCAACACCCTGACCATGTTCGGCATGGTGCTG GCCATCGGCTTGCTGGTGGACGACGCCATCGTCGTGGTGGAAAACGTCGAGCGGGTGATGAGCGAAGAAGGCTTGTCGCCGAAGGAAGCGACCAAGAAGT CCATGGGCCAGATCCAGGGCGCACTGGTCGGTATTGCTCTGGTTCTGTCGGCGGTACTGTTGCCGATGGCGTTCTTCAGCGGTTCCACCGGTGTGATCTA CAAGCAGTTCTCGATCACCATCGTCTCGGCCATGGCCCTGTCGGTACTGGTCGCGCTGATCTTCACCCCGGCGCTGTGCGCAACCATGCTCAAGGCGATT CCGAAAGGCGAGCATGGCACGCCGAAAAAAGGCTTCTTCGGCTGGTTCAACCGTAACTTCGACCGTGGCGTTCGCAGCTACGAGCGCGGCGTTGGCAACA TGCTGTCGCGCAAAGCCCCGTATCTGCTGGCGTATCTGCTGATCGTTGTTGGCATGATCTGGCTGTTCACCCGTATTCCGACCGCGTTCCTGCCGGAAGA AGACCAGGGCGTACTGTTCGCCCAGGTGCAAACCCCGGCCGGTTCCAGTGCCGAGCGTACGCAAGTCGTGATCGACGAAATGCGTTCCTACCTGCTGGAG AAAGAATCCGGTGCGGTCGCCTCGGTGTTCACCGTTAACGGCTTCAACTTCGCCGGTCGCGGTCAGAGCTCGGGTCTGGCGTTCATCATGCTCAAACCGT GGGACGAGCGTGACGCGAGCAACAGCGTGTTCGCCCTCGCCCAGCGTGCGCAGCAACACTTCTTCAGCTTCCGCGACGCGATGGTGTTTGCTTTCGCCCC GCCAGCGGTACTGGAATTGGGTAACGCCACCGGTTTCGACGTGTTCCTGCAGGACCGCGCCGGTATCGGTCACGAAAAACTGATGGAAGCGCGCAACCAG TTCCTCGGTCTGGCAGCGCAGAGCAAGGTGCTATATCAGGTGCGTCCGAACGGCTTGAACGACGAGCCGCAATACCACCTGGAAATCGACGATCAGAAGG CCCAGGCCCTCGGTGTGAGCATTGCCGACATCAACAGCACCCTGTCGATCTCCTTCGGTAGTAGCTACGTCAACGACTTCATCGACCGTGGTCGCGTGAA GAAGGTGTACGTGCAAGGTCAGGCCGGTGCTCGCATGAGCCCTGAAGACTTGAAGAAGTGGTACGTGCGCAACAGCGCCGGGACCATGGTGCCGTTCTCC GCGTTCGCCAAGGGCGAGTGGATCTACGGATCGCCGAAACTGGCGCGTTACAACGGTGTAGAAGCGATGGAGATCCTCGGCTCTCCGGCGCCGGGTTACT CCACCGGTGATGCGATGGCCGAAGTCGAAGCGATTGCCAAGAAGCTGCCGGCGGGTGTCGGTATCTCCTGGACCGGTCTGTCCTATGAGGAACGTCTGTC GGGTTCGCAAGCGCCCGCGCTGTACGCTCTGTCACTGCTGATGGTGTTCCTGTGTCTGGCGGCGTTGTACGAGAGCTGGTCGATTCCGATCGCGGTTATG CTCGTGGTGCCACTGGGGATCATCGGTGCGCTGCTGGCCACCAGCCTGCGCGGTCTGTCCAACGACGTGTACTTCCAGGTAGGCCTGTTGACGACCATCG GTCTGGCGGCTAAAAACGCCATTCTGATCGTCGAATTCGCCAAGGAACTGCATGAACAGGGGCGTAGCCTGCGTGACGCGGCGATCGAAGCCTGCCGCAT GCGTCTGCGCCCGATCATCATGACCTCGCTGGCCTTCGTCCTCGGTGTTGTACCGTTGGCGATCTCCACTGGCGCCGGTTCAGGCAGTCAACATGCGATC GGTACCGGCGTGATTGGCGGTATGCTCACGGCCACGATCCTGGCGATCTTCTGGGTCCCACTGTTCTTCGTTACGGTTTCGTCCATCGGCCAGCGTAAGA TCGCTGACGAGGATGAAGCGACTGAAACTCCTAAAGAGGCTGGCCAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCAAGTCGCTACTCTCCATCGCAGTCGCCGCCTTCGTGCTGAGCGGTTGCTCGCTGATACCTGATTATCAGCAGCCTGAGGCTCCGGTCGCAGGTCAGTA CCCGCAGGGGCCGGCGTACTCGCCGGCCCAGGCTCCGGCGCAGGCCGCTGCCGAGCAGGGCTGGAAGCAGTTTTTCCATGACCCTGCGCTGCAACAGCTG ATCCAGGTGTCCCTGGAAAACAACCGCGACCTGCGTGTCGCGGCGCTGAACATCGACGCTTACGCGGCTCAATACCGCATCCAGCGTGCCGATCTGTTCC CGGCGGTTTCGGCCAATGCCAGCGGCAGCCGTCAGCGGGTTCCGGCGCGTGCGTCGCAGACCGGCGAAGCGGGCATCACCAGCTCCTACTCCGCTACCGT TGGCATCAGCGCCTACGAACTCGACCTGTTCGGTCGCGTTCGCAGCCTGAGCGAACAAGCGTTGCAACAATACTTCGCCACTGAAGAAGCACGCCGCAGC
Amino Acid Sequence
>multidrug transporter
MSKFFIDRPIFAWVIALVIMLVGALSILKLPINQYPSIAPPAIAISVTYPGASAQTVQDTVVQVIEQQLNGIDNLRYVSSESNSDGSMTITATFEQGTNS DTAQVQVQNKLNLATPLLPQEVQQQGIRVTKAVKNFLLVIGVVSRDGSMTKDDLSNYIVSNMQDPISRTAGVGDFQVFGAQYAMRIWLDPAKLNKYNLTP ADISSAISAQNVQVSSGQLGGLPALPGQQLNATIIGKTRLQTAEQFKAILLKVNQDGSQVRVGDVADVGLGGENSTISAQFNGKPSSGLAVKLANGANAL DTAKALRKTIDELKPFFPQGMEVVFPYDTTPVVTESIKGVVETLVEAIVLVFLVMFLFLQNFRATVITTMTVPVVLLGTFGILAAFGFSINTLTMFGMVL AIGLLVDDAIVVVENVERVMSEEGLSPKEATKKSMGQIQGALVGIALVLSAVLLPMAFFSGSTGVIYKQFSITIVSAMALSVLVALIFTPALCATMLKAI PKGEHGTPKKGFFGWFNRNFDRGVRSYERGVGNMLSRKAPYLLAYLLIVVGMIWLFTRIPTAFLPEEDQGVLFAQVQTPAGSSAERTQVVIDEMRSYLLE KESGAVASVFTVNGFNFAGRGQSSGLAFIMLKPWDERDASNSVFALAQRAQQHFFSFRDAMVFAFAPPAVLELGNATGFDVFLQDRAGIGHEKLMEARNQ FLGLAAQSKVLYQVRPNGLNDEPQYHLEIDDQKAQALGVSIADINSTLSISFGSSYVNDFIDRGRVKKVYVQGQAGARMSPEDLKKWYVRNSAGTMVPFS AFAKGEWIYGSPKLARYNGVEAMEILGSPAPGYSTGDAMAEVEAIAKKLPAGVGISWTGLSYEERLSGSQAPALYALSLLMVFLCLAALYESWSIPIAVM LVVPLGIIGALLATSLRGLSNDVYFQVGLLTTIGLAAKNAILIVEFAKELHEQGRSLRDAAIEACRMRLRPIIMTSLAFVLGVVPLAISTGAGSGSQHAI GTGVIGGMLTATILAIFWVPLFFVTVSSIGQRKIADEDEATETPKEAGQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site