Strain | Pseudomonas aeruginosa H1l COntig19, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GACCGTGGCCCGCCTGGAAAGCGCCGGTGTTCCCAACCTGCTCAATGGCCAGGCGCTGTTCAGCGGTCTCTACCTCAACGAGCTGTTGATCCGCCTGTTG CCGGCGGAAGACCCGCAGCCGGAAATCTTCGCCCACTACGCCGCGACCCTGCCGCTGCTGGCGGCGGGGCGCCCCATCGAACCGCTGCTGCGCGCGTTCG AATGGCGCCTGCTGGAGCAACTGGGCTATGGTTTCGCTCTCGATGTCGACATCGATGGGCGCCCGATCGAGCCGCAGGCGTTGTACCAGCTTTTGCCAGA GGCCGGCCTGGAGCCGGTGGCGCAACTGCAACCCGGGCTGTTCCAGGGCTCCGAACTGTTATCCATGGCCGACGCCGACTGGAGCGCCCCCGGCGCCCTG GCGGCGGCCAAGCGCCTGATGCGCCAGGCGCTCGCTCCCCATCTGGGCGGCCGGCCGCTGGTCAGCCGCGAGCTGTTCATGAACCGTAAGGAGTCACCCC
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DNA Sequence for Gene |
>U864_RS0127375
GTGACTGAAGCCACTCGAATTCTGCTCGGCGTGAACATCGATCACGTCGCCACCCTGCGCCAGGCCCGGGGCACCCGCTATCCGGACCCGGTGAAGGCCG CCCTGGACGCCGAGGAAGCCGGCGCCGACGGTATCACCGTGCACCTGCGCGAGGACCGCCGGCATATCCAGGAACGCGACGTGCGGGTGCTCAAGGAAGT GCTGCAGACGCGGATGAACTTCGAGATGGGGGTCACCGAGGAAATGCTCGCCTTCGCCGAGGAGATCCGGCCGGCGCATAGCTGCCTGGTCCCCGAGCGC CGCGAGGAACTGACCACCGAGGGCGGCCTCGACGTCGCCGGCCAGGAACAGCGCATCCGCGACGCGGTGCGACGCCTGGCTGCGGTGGGCAGCGAAGTGT CGCTGTTCATCGATCCCGATCCGCGGCAGATCGAGGCCTCCGCCCGGGTCGGCGCGCCGGCTATCGAACTGCATACCGGTCGCTACGCCGACGCCGAAGA CCCCGAGGAGCAGGCCCGCGAGCTGCAGCGGGTACGCGAGGGCGTGGCCCTCGGGCGTTCCCTCGGCCTGATCGTCAACGCCGGGCATGGCCTGCACTAC CACAATGTCGAGCCGGTCGCGGCCATCGACGGCATCAACGAGCTGAACATCGGCCACGCCATCGTCGCCCACGCCCTGTTCGTCGGCTTCAGGCAGGCGG TGGCCGAGATGAAAGCGCTGATGCTGGCCGCGGCGACCAAGCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGCAATCGCGCCCCGCTTCCCGTCGACCTGCGGGGCGGATGAAAGCATGAAAAAAAGCCCATCCGAGGATGGGCTTTTCCCTATTCGCTGTCAGGGCTTG CGCGCCACCAGCGTGGCGCGCATCGGTGCCGGCAGGCCTTCGACGGTTCGCGAACGGTCCTGCGGATCGAGGAATTCCGGCAGCGACTGGAAACGCATCC ATTCGGTGGAGCGTTGTTCCTCGACGCTGGTCAGGCTGACGTCGACGCAGCGCGCGTCGGCGAACCCGGCGCGGCGCAGCCAGAGCTCCAGGGCTGCCAC CGAGGGCAGGAACCAGACGTTGCGCATCTGCGCGTAGCGGTCCTCGGGCACCAGCACGGTGCTGGCGTCGCCTTCCACCACCAGGGTCTCCAGGACCAGT TCGCCGCCGCGCTTCAGGCAGTCCTTGAGCGCCAGCAGGTGGTCGATGGGCGAGCGACGGTGATAGAGCACGCCCATGGAGAATACCGTGTCGAAGCCTT
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Amino Acid Sequence |
>pyridoxine 5'-phosphate synthase
MTEATRILLGVNIDHVATLRQARGTRYPDPVKAALDAEEAGADGITVHLREDRRHIQERDVRVLKEVLQTRMNFEMGVTEEMLAFAEEIRPAHSCLVPER REELTTEGGLDVAGQEQRIRDAVRRLAAVGSEVSLFIDPDPRQIEASARVGAPAIELHTGRYADAEDPEEQARELQRVREGVALGRSLGLIVNAGHGLHY HNVEPVAAIDGINELNIGHAIVAHALFVGFRQAVAEMKALMLAAATKR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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