Pseudomonas aeruginosa H1l, U864_RS0112915
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa H1l COntig6, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGAGGTGAGCTTCAGCAACCTGGGCCTGGATTCGCCGATCGCCCAGGGCCGCGACGGCACCGTGCACAAGGTGGTCTACGGCCTGATGAGCGGTGACAGC AGCGCCCTGCAGGGGCAGATCGACGCGCTGCTGAAAGCGGTCGACCCGAGCCTGTCGATCAACTCCACCTTCGACCAGTTGGCCGCGGCCGGCGTCGCCC ATGCCACCCCGGCTGCGGCAGCGGCGGAAATCGGCGTGGTCGGCGTGCAGGAACTGCCGCACGACCTGGCCCTGGCGGCCTGAGCAACTGTCCACGATAG CGTTCGTGGACTGCTTGCGCTAAAGGCCGGAGAGGAGTTGGCGCTCCTCTCCGGCGCACGAACCGCCGTCGCTGCGCCTCGCACCCGTGGCGACGGCGGC CCCCGGATTGTTCCTCCGCCGGCCGTGCCCGGCAAGCGGAGACTGCCGCAATGTCCTCCGGGCCCGCTCGCGGCCCGGACACCCACAGGACCCGACTCCG
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| DNA Sequence for Gene |
>U864_RS0112915
ATGAAGCTCCGGCCGGCCTCGCCGCGCAATGAAATCCTCGCCACCCTCGGCCGCTTCCGCCCGGCGCTGCGCAGCGTCGCGCTGTTCACCGCGGTGATCA ACCTGCTGATGCTGGCGCCGTCGCTGTACATGCTGCAGGTCTACGACCGGGTGCTCGGCTCCGGCAACCACATGACCCTGCTGATGCTGACCCTCATGGT GCTCGGCCTCTACCTGCTGCTCGGCGCCCTGGAGTGGGTGCGCAGCCTGGTGGTGATCCGCCTCGGCGGCCAGCTCGACATGCAACTCAACCAGCGCATC TACGACGCCTCGTTCCGCGCCAGCCTGGAGCGCGGCGAGCAGGCCGTCGGGCAGGCGCTGAACGACCTGACCAGCCTGCGCCAGTTCCTCACCGGCAACG CCCTGTTCGCCTTCTTCGACGCGCCCTGGTTCCCGCTCTACCTGCTGGTGATCTTCCTCTTCAGTCCCTGGCTCGGCCTGCTCGCCCTGGTTGGGGCGCT GCTGCTGGTGCTGCTCGCCTGGGTCAACGAAAGCCGCTCGCGCGAACCGCTGGCCGAGGCCGGGCAACTGTCGATCCTCGCCACCCAGCAGGCCTCGGCC AACCTGCGCCAGGCGGAAACCCTGGCGGCAATGGGCATGTTGCCGGCCATGCGCGCGCGCTGGTTCGCCCAGCACCAGGCCTTCCTTGCCCGGCAGAACC TCGGCAGCGAGCGCAGCGCGGCGATCGGCGCGACCTCCAAGGGCGTGCGCCTGGCCCTGCAGTCGCTGGTGCTCGGCCTCGGCGCCTGGCTGGCGGTGGA AGGCCTGATCACCCCGGGGATGATGATCGCCGGCTCGATCCTGATGGGCCGCGTGCTCAGCCCCATCGACCAGTTGATCGCGGTCTGGCGCCAGTGGAGC GGCGCGCGGCAGGCCTACCAGCGACTGGCGCGGCTGCTCGAGGAGAATCCGCCGGCCGCCCTGGGCATGCCGCTACCGGCGCCGCGCGGCGCGTTGCGCG TCGAGCGGCTCTGCGCGGCCGCGCCGGGACGCGAGCAGGCATTGTTGCAGGACCTCGGTTTCGCCCTGGAGCCTGGCGAAGCGCTCGGCGTGATCGGGCC GTCCGGTTCCGGCAAGTCGACCCTGGCGCGCTTGCTGGTGGGCGCCTGGCAGCCGCTGTCCGGCGCGGTGCGCCTGGACGGCGCCGACCTGCGGCAGTGG AGCGCGGCGGCACTGGGGCCGCACATCGGCTACCTGGCCCAGGACGTGCAACTGTTCGCCGGCAGCATCGCCGAGAACATCGCGCGCTTCGCCGAGGTGG ATGCCGAGAAGGTGGTGGCGGCAGCGCGCCTGGCCGGCGTGCACGACCTGGTGCTGCGCCTGCCGCAGGGCTACGACACGCGCCTTGGCGACGGCGGCGC CGGTCTCTCCGGCGGCCAGCGCCAGCGCATCGGCCTGGCCCGCGCGCTGTACGGGCGACCGGCGCTGATCGTGCTCGACGAACCCAATGCCAGTCTCGAC GAGGCGGGTGAGGCGGCCCTGGCCGAGGCCATCGCGGCGATGCGCCGGCAGGGCAGCAGCCTGGTGCTGGTCACCCACAAGCCGGCAGTGCTGGCGCTGA CCGACAAGCTGTTGTTGCTGCATGGCGGGCGCCTGCAGCGTTTCGGCGCGACCGCCGAGGTGCTCGCCAGCGCCTCGCCGCCGGCCGCTGCGGCCCCGGC CCCGGCGCCGACACGGCCGACGCCGGCGTTCGGTTTCGGCTACCGGCCGGGACCGGGCATGCCGGTCGGCGGTGTGCCGGGAGGAGCGGCGCGATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGGGCAGGCGCGGTTGCGCGAAGTCGGCGCCGGCGGCGCGGCGCTGGAACTGGACGAGAAGCGCTTTTCCCGGCTCGGCTGGGGGCTGGTGCTGCTCGG CTTCGTCGGCTTTCTCCTGTGGGCCGGGTTGGCCCCGCTGGACAAGGGCGTCGGGGTCTCCGGCACGGTGATGGTGGCCGGTAGTCGCAAGGCCGTGCAG CACCCTACCGGTGGCCTGGTCAGGCACATCCGCGTGCACGAAGGCGAGCGGGTGGAGGCAGGACAGGTGCTGCTGGAGATGGACGCTACCCAGGCCCGGG CCCAGGCCGATGGCCTGTTCGCCCAGTACCTGGCGGCGCTGGCGAGTCTGGCGCGGCTGAGCGCCGAGCGCGATGAAAAGGCGCGGATCGAGTTTCCCGC CGAGCTGCTGGCGCTGGACGACCCGCGCCTGCCGACCCTGCTGGAACAGCAGCGGCAGTTGCACGACAGCCGTCGGCGGGCGCTGCGCCTGGAACTCGAT
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| Amino Acid Sequence |
>transporter HasD
MKLRPASPRNEILATLGRFRPALRSVALFTAVINLLMLAPSLYMLQVYDRVLGSGNHMTLLMLTLMVLGLYLLLGALEWVRSLVVIRLGGQLDMQLNQRI YDASFRASLERGEQAVGQALNDLTSLRQFLTGNALFAFFDAPWFPLYLLVIFLFSPWLGLLALVGALLLVLLAWVNESRSREPLAEAGQLSILATQQASA NLRQAETLAAMGMLPAMRARWFAQHQAFLARQNLGSERSAAIGATSKGVRLALQSLVLGLGAWLAVEGLITPGMMIAGSILMGRVLSPIDQLIAVWRQWS GARQAYQRLARLLEENPPAALGMPLPAPRGALRVERLCAAAPGREQALLQDLGFALEPGEALGVIGPSGSGKSTLARLLVGAWQPLSGAVRLDGADLRQW SAAALGPHIGYLAQDVQLFAGSIAENIARFAEVDAEKVVAAARLAGVHDLVLRLPQGYDTRLGDGGAGLSGGQRQRIGLARALYGRPALIVLDEPNASLD EAGEAALAEAIAAMRRQGSSLVLVTHKPAVLALTDKLLLLHGGRLQRFGATAEVLASASPPAAAAPAPAPTRPTPAFGFGYRPGPGMPVGGVPGGAAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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