Pseudomonas aeruginosa H1l, U864_RS0109080
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa H1l COntig4, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCGCTCGTGCTCCCGAGGATTTCTCCAAGAAGTTCCGCTATAACCAGCGGCGCGAAGTGCGCCTGGTGGAGGAGGCCGGTGGCCAGGTGCGCCAGGCAGA CAGCTTCGCCCCGGCCGAGTTCGCTGCCATCTATCTTGAACTGTTCCAGCGTCGCTGGGGTTTCCCGGCCACCGGCGCGGAGCGCATGGCCGAGGTCTTC GAGCGGCTGCGCGAATTGCTGCGCGGCTCGGTCCTGCTGCTCAACGACCAGCCCATCGCGGTCCAGGTACTGTATCGCGCCGAAGCGCCGGGCTGGCTCA GCGTCGAGTACATCAACGGCGGCGTCGATCCGCAGACCCACGAGTTCAGCCCTGGCAGCGTGCTCAGTTACCTGAACACCCAGGCCGCCTGGGAGGATGC GCGAGCGCTGGGCAAACCCCTGCGCTATTCGTTCGGTCGCGCCGACCGCGAATACAAGGATCGCTGGTGCCATCCTTCTCCGGTCTTCCAGGTCTGAAGC
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| DNA Sequence for Gene |
>U864_RS0109080
ATGAGCGCACGCAAGCAGCAGTTGCTCAAGCGTCATCGACGCAACAAGCGGATCGGCCTACTGGTTGCGCTGCTGGCATTGCTGGCCGTCGGTCTGCTGG TCAGCCCCTGGTTGTTGCCGATCCTCCTCGTGGCCCTGTGGGTCGCCCACGAAGCCTGGTTCGCCGATCACCTGTTCTATTCGCCGGGCGAGGACTACCG CTACCGTTTCGCGGAAGGGGTCGAGTCGCTGCCGGTACGCCTGGCGGATGGCCGTCTGCGAGTCGACGGTGAGCTGCGCGAAGGCGATACGCTGGTGCTT GGCATCGGCGTGCGCGCTGGCTGGCTGGGGCGCTTCCTCGAACCCTCGGTGCTGCTGGAAGGTGGCGCGGAGGCCGATGCCCAGGCTTTCGAACGTGGGG TGAACGGCTTGCGCTACCTGAACCTGACGGGACTGGCCGGGCCGCTGGGCGAGGGCCGGATTCGCCTGCGCGGCCGGCATTGCCGGCTGGTCGGCGAACC GACCCTGTGGCGTGCGCGCCATCCCGACTACCGTGATCGGCGGGTGATGGTCATCGCTCCGCATGCCGACGACGCCGAGCTGGCCGCCTTCGGCCTCTAC AGCCAGGCTCGCGAGGCCTGGATCGTGACCCTGACCGCCGGCGAGATCGAAACCGAGCATTACCGCCGCATGGGCCTCGACGGAATAGCTGCGGCGCGCC TGAAGGGCCGCCTGCGCGCCTGGGATAGCCAGGCCGTGCCGACGTGGGGTGGGGTGCCGGCCGAGCGCTGCGTGCAACTGGGTTATTTCTGCCTGCAATT GCCTGCCATGCAGGCGAACCCGGGCGAGGTGGTGCCGTCCCGTGAGGCCGATCTCGCCGATATCCGTCCGTTCCGCCAGTTCAACCGCCTGCGCCTGGCC AGCGATGCCGACGGCCTGTCGACCTGGAACAATCTGCTGGCCGATCTCCGCGAGCTGATCCTGCTGGCACGTCCCGAGGTTATCGTCCTGCCTCATCCGC ATTTCGATCCGCACCCGGACCATGTCCGCGCCCAGGAGGCCGTGCGCGAGGCGCTCCAGGGTCTGGACTGGCAGCCGCAGGCATTGTTGCACTATGCCAA TCACCTGCACGACAACGATCGCTGGCCGATGGGCGATGCGCACATGGGGGTCAGCCTGCCGCCGCTGACCGAAGAATGCTCGCCGTTGCTGCCATGGACG CTGGCGCTGGAGCGCACGCGCCAGGTGGACAAGGCCATGGCCTTGGGCATGATGCACGACCTGCAACCCAGGCCGCCGTTCAAACGCCGTCTGCGCCGCC GTCTGCAGGGCTGGCTCGCCGGGCGTCGCTGGCCGGCTTACGGCGAGGACGAGTTCATGCGCAAGGCGGTGCGTCGGCACGAGTTGTTCTGGGTGGAGTC GCTGGATGGGGAGGCGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGCTTGGGTCGAGCGTTCGGCAAGGTTCGAGCCGCCATGCTGCTTCGGAGCAGCCGCGAGGATGAAGGTCTGATGAAAGTTCTGTTTCTGGTCCAGAAAG AGCAGCGCGCGATCCTGGATCGCCTGTACGACGGCATCGCCGCCCATTGCGAGTGCGATACCCGCTGGCTGAGCAGCGAGGAGCAGGCCGACCTGCGCGG CTACTTCCGCAAGCACGTGGATGTCTCGCGCTACGACCGCATCCTGTTCTTCCTCCGTTTCAAGAAGGAAATGCGCCAGGTCCGCTTCATCCGCAGCGTG CCCAACCTGGTGATCCTCGAGCACGATGCCTACCAGAACTACATTCCCTGCAAGTACACCGGCAAGTTCAGCGCCCATTACCGGCGCCTGCCCTGGGCAC GGGTGATCAGTTCGGGCCATACGGTCAGCGAACGCCTGCGCCAGGAGGGATTCGACGCGGTATTCGTGCCCAAGGGCTACGACCAGACCCTGTTGCATGA
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| Amino Acid Sequence |
>GlcNAc-PI de-N-acetylase
MSARKQQLLKRHRRNKRIGLLVALLALLAVGLLVSPWLLPILLVALWVAHEAWFADHLFYSPGEDYRYRFAEGVESLPVRLADGRLRVDGELREGDTLVL GIGVRAGWLGRFLEPSVLLEGGAEADAQAFERGVNGLRYLNLTGLAGPLGEGRIRLRGRHCRLVGEPTLWRARHPDYRDRRVMVIAPHADDAELAAFGLY SQAREAWIVTLTAGEIETEHYRRMGLDGIAAARLKGRLRAWDSQAVPTWGGVPAERCVQLGYFCLQLPAMQANPGEVVPSREADLADIRPFRQFNRLRLA SDADGLSTWNNLLADLRELILLARPEVIVLPHPHFDPHPDHVRAQEAVREALQGLDWQPQALLHYANHLHDNDRWPMGDAHMGVSLPPLTEECSPLLPWT LALERTRQVDKAMALGMMHDLQPRPPFKRRLRRRLQGWLAGRRWPAYGEDEFMRKAVRRHELFWVESLDGEA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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