Pseudomonas aeruginosa H1l, U864_RS0108265
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0000160 | phosphorelay signal transduction system |
Inferred from Sequence Model
Term mapped from: InterPro:PF00072
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| NCBIfam | TIGR00254 | JCVI: diguanylate cyclase (GGDEF) domain | IPR000160 | GGDEF domain | 374 | 536 | 7.1E-46 |
| PANTHER | PTHR45138 | REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM | - | - | 64 | 539 | 3.8E-93 |
| Pfam | PF00072 | Response regulator receiver domain | IPR001789 | Signal transduction response regulator, receiver domain | 252 | 363 | 1.4E-21 |
| CDD | cd00156 | REC | - | - | 253 | 353 | 5.43678E-23 |
| Gene3D | G3DSA:3.30.70.270 | - | IPR043128 | Reverse transcriptase/Diguanylate cyclase domain | 376 | 540 | 8.7E-53 |
| Gene3D | G3DSA:3.40.50.2300 | - | - | - | 245 | 375 | 3.5E-27 |
| SUPERFAMILY | SSF52172 | CheY-like | IPR011006 | CheY-like superfamily | 246 | 378 | 7.26E-30 |
| Pfam | PF00990 | Diguanylate cyclase, GGDEF domain | IPR000160 | GGDEF domain | 379 | 533 | 2.9E-41 |
| SMART | SM00267 | duf1_3 | IPR000160 | GGDEF domain | 366 | 537 | 2.6E-55 |
| SUPERFAMILY | SSF52172 | CheY-like | IPR011006 | CheY-like superfamily | 134 | 243 | 3.22E-5 |
| FunFam | G3DSA:3.30.70.270:FF:000001 | Diguanylate cyclase domain protein | - | - | 372 | 538 | 8.4E-49 |
| CDD | cd01949 | GGDEF | IPR000160 | GGDEF domain | 379 | 534 | 8.25412E-59 |
| FunFam | G3DSA:3.40.50.2300:FF:000346 | Diguanylate cyclase response regulator | - | - | 247 | 375 | 3.8E-63 |
| Gene3D | G3DSA:3.40.50.2300 | - | - | - | 112 | 243 | 1.0E-5 |
| Coils | Coil | Coil | - | - | 48 | 68 | - |
| SMART | SM00448 | REC_2 | IPR001789 | Signal transduction response regulator, receiver domain | 250 | 363 | 2.8E-26 |
| SUPERFAMILY | SSF55073 | Nucleotide cyclase | IPR029787 | Nucleotide cyclase | 382 | 539 | 5.49E-48 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.