Pseudomonas aeruginosa H1l, U864_RS0104450
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa H1l COntig2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TAGTCCGCTCGCGCGTTTTCTGGTCTTGGGAGGCGTCGACAGTAATCCAGGAAAGGTTTCACGGGAGGAAATGAACCAGTGGGTAGCCGAAGGCTTGTTG GAGTGGCCTGGCCATGTGCATGACATCAAGGCATGGGTGGCCAATACGAGTGTATTCGTGCTGCCCTCCTATTATAGAGAAGGTGTGCCGAGAAGTAGTC AGGAGGCCATGTCCCTGGGGAAGCCTGTGATAACGACTGACTGGACGGGATGTCGTGAAACGGTACTGGATGGTTTCAATGGATTTCTGGTACCGATCAA GAGTCCGCAGAGTTTAGCCGCGGCAATGTTGAAGTTCATCGAGTCGCCTTCGCTCATCGCACGTATGGGAGAAGCCAGTAGATCGCTGGCGGAACAGCGC TATGACGTTTTCAGGATAAACAATACGATGCTTTCTGCGTTGTAGGGATCTGGCTGTGAGTTGTATGAAGGGTAATGCGCCGGTACTTGCGGCCGTAGAT
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| DNA Sequence for Gene |
>U864_RS0104450
ATAAGCAAGGGTTTTAGAGTCTACAGGGCTCCTCATCAAAGGATGTTGCAGGCCATCTGGGGTGAGAGAAAGAAATTTTATTCGGAATTCTGGGCTCTGC GGAATGTGAGTTTCCAGGTTTTTCCTGGGGAGGTTGTTGGAGTAATCGGCTGCAACGGCTCCGGGAAGTCCACCTTGCTGCAGATACTTGCGGGTACCTT GCGCCCTACGAGTGGACAGGTGGTTCGCCCAGAAAGGGTAGCGGCATTGTTGGAGCTGGGGGCCGGTTTCAACATGGAGTACACCGGCAGGGAAAACATA ATCTTCAATGCCATGCTTCTTGGATTGGGCGAGCAGGAGATTTCTGAACGCCTCGACGAGATAATCCAGTTTTCCGATATCGGTGAGTTCATCGATCGTC CGGTTAGAACATATTCGAGCGGTATGTTCGTGCGTTTGGCTTTCTCCATTGCGGCATATGTCGATGCCGATGTGCTGATCGTGGACGAGGCCCTGGCGGT AGGTGACGCCGCGTTTCAGTTCAAATGCCTGAACCGGCTTGAAGAACTGCTGCTGAAAGGCATCACCATCCTGCTGGTCTCCCACGATATACAGTTGATC AAGAGTTATTGTAGTCGAGCGATCTATCTATCCAAAGGTAGAGTGATATTCGATGGCGACTGTGAAACAGCCACGGAACTCTATCTGCGGGACAGTATAG AGACACAGCGGGCGGAAGTCCGCTCAGGAAGCCTGATCGCTTCTGGCGAACACGGGAACTCGGTAATTGCATATGGAAATGGGCAGGGCAGGTTTCTATC CATCCGTATGGGTGTACTTGACGAAGCCCGGGATTACTTCGATTCGGGCGAACGTGTCTGGGTCGAGGTACTTGTGCAATTTGACCTACCCGTCCCGGAG CACCCAAAAATCACCCTGACTATCCGTGACCAGCGCGGTTACAACCTCTATGGCATAAACAATTTATTGCTGGGCAAGGCTCTGAATGTCGAGCCTGACG GGCGCTTGAGAACACGTATCAGCTTCGACTGCGACTTGCAGGCCGGCGAATACGCCTTGACGTTTCGTCTGGAGAACTCTTTGTCGGAGTCCGTTTGCGA ACTCATGGATAAAAAGGTCAATGCGGCGATATTCAGGGTCTTCAATTCGCCCAAGTGCTTCGATGCAGTGGTGAATCTGCATGGAGCATTCGAGCCGGTT CCGTTCTGCTGCGAGACCCGGGCTACCCAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGTCATCGTCTTTGACCATGGTATTCGTCGTCCACGCCGGCGAGCTGGAAATCAAGTCTGCCGTGTTGGCGGCTTCTCTACGCAAACGCTTTGGCTTTTC CATGGATATCATTGCCGCATGTCCATCGGGAAAGGCTGACTGGGGTGTGCCAAGCGATGCATCCCGGCGCTTATATGAGCGTTTGGGCATTCCTCTTTTG CCTATGGATAGTCCTTTCGGGCCAGAGTATCCAATAGGCAACAAGTTCGCGGCGTTGGCGCTGGGGCCGGCTGTTGGGCATACGTTGTTTCTCGACAGTG ACATGATCTGTGTCGATGCATTCGAAGCTGACATGCTTTGTCGTTTCGATGCGGCACTCAAACCTGCCGATATGGCATTGGTGGCAAAACAGAACGATTA CTGGGAACGCATATACGCCCATGCGGGATCGGCATTGCCTGGAGATCGGGTAGTGACCACTTGTTCCGGGGAAGCGATGCCTGCGTACTATAACGCTGGC
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| Amino Acid Sequence |
>ABC transporter ATP-binding protein
MSKGFRVYRAPHQRMLQAIWGERKKFYSEFWALRNVSFQVFPGEVVGVIGCNGSGKSTLLQILAGTLRPTSGQVVRPERVAALLELGAGFNMEYTGRENI IFNAMLLGLGEQEISERLDEIIQFSDIGEFIDRPVRTYSSGMFVRLAFSIAAYVDADVLIVDEALAVGDAAFQFKCLNRLEELLLKGITILLVSHDIQLI KSYCSRAIYLSKGRVIFDGDCETATELYLRDSIETQRAEVRSGSLIASGEHGNSVIAYGNGQGRFLSIRMGVLDEARDYFDSGERVWVEVLVQFDLPVPE HPKITLTIRDQRGYNLYGINNLLLGKALNVEPDGRLRTRISFDCDLQAGEYALTFRLENSLSESVCELMDKKVNAAIFRVFNSPKCFDAVVNLHGAFEPV PFCCETRATQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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