Pseudomonas aeruginosa H1l, U864_RS0100250

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa H1l COntig1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTGCTCACCGCGATCCGCAGGGTCGCCGGCGGCGGACGCTACATCGACCCGGACCTTGCCGATCGGATGGTCTTCGAGGTTGGCCTGACCGATTCGCGTC CGCCCCATGCGCTGCTCTCCGAGCGCGAGTTCTCGGTGTTCGAGCGGCTGGTGCAGGGCGCCAACGTCAACGAGATCGCCCAGCAACTGGCGGTCAGCAA CAAAACCATCAGTACCCACAAGGCACGCCTGATGCAGAAGCTCAACGCGCATTCGGTAGCCGACCTGGTGCGCTACGCGATGGAGCACCGCCTGCTCTGA CAGGGGCGTTCGCCCAGGTTTTGCTCGCGGCTTGTGCGCCAGGTCCGGTTTTCGCGATCTGCTGTCTACCTGGCTTCCGCGCGGCAGGGAATGATGCTTG CCGGCCAACACGATAAGGAGAAGAAACGATGTTGCCAGCCATGAGGACGGGCCTGTTGTGCGCCCTTCTCGGAGTTACCGCGCCCGCCTGGGCGGAATAC
DNA Sequence for Gene
>U864_RS0100250
GTGACCGTGATTTCCTTCGGCGGCGCCAACAAGGAAGCCCAGGAAACCGCGTTCTACAAACCCTTCAAGAGCGCCACCGGCAATCGCGTGGTGCATGGCT CCTACAATGGCGACCTGGCCAAGCTCAAGCGCATGGTGGAGATCAGCCACGTCTCCTGGGACGTGGTGGAAGTCGAGGCGCCGGAGCTGGCGCGCGGTTG CGAGGAAGGTCTGTTCGAGAAGCTGGACATGGCGAAGGTCGGCGATCCCGCGGATTTCGTTCCCGGCGCGGTGCAGCCCTGCGGAGTCGGCATCTTCGTC TGGACCACGCTGCTTGCCTACAACCCCGGCAAGGTTGCGGGCAGCCCGCAGGGCTGGGCGGATTTCTGGGACGTGAAGAAGTTTCCCGGCAAGCGCGGCC TGCGCTGGGGCGCCAAGTACAGCCTGGAGTTCGCCCTGATGGCCGATGGCGTGGCGCCGAAGGACGTCTACCAGACGCTGGCGACGCCCGCCGGCGTCGA GCGGGCATTCCGCAAGCTCGACGAGCTGAAGCCCTATATCCATTGGTGGAAGTCCGGGCAGGACCCTGTGCGCGACCTGGCTGATGGCACGGTGGTGATG AGTTCGGCCTACAACGGGCGGATCGCCGCGGCGCAGGCCGAGAAGCAGCGCCTGGCAATGGTCTGGAGCGGCGGCGTCTACGATTTCGACTTCTGGGCGC TGCCGGTCGGGGTTTGGAAGAAGCAGTTGGCCGAGGAGTTCATCCGTTTCGCCAGCCAGCCGGAGCAGCAGAAGGCTTTCGCCGAGAACATCGCCTACGG CCCGGCCAACCGCAAGGCGGTAGGCCTCCTCGATCCGCAAGTGGCTGCCAACCTGCCGACCGCACCGCAGAACATGCAGAACGCGGTGGGTATGAACGTG GCCTTCTGGGCGGAGCACGGCGAGGCCCTGGAGCAGCGTTTCCAGAACTGGGCCAAGCGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGAGGCCGTTGCGCGCCAGCCGGAGAGCGCTGGCGCGCAAACCTTTGCCCTTCTCGAAAGCCCCTTCCCAGAGCGGTCTGGCCCATTCCGGGGGGCATCT TTTTTGTAGGGCGATTCCTACAAAGAGCTTTCCTTTCCCCTGATAGAAAACTCTCTTGCCGGCCGATTTGCGTCCTGCGCCGGGTTCTCTAGGCTGTTCG CACAGCATCCATAAAACGAACAAAGGTGCGGTTATGGCCGAGACTCAAGGCGGCGATGTGCTGGTCAGCTTCCGTGGCGTGCAGAAAAGCTACGACGGCG AGACCCTCATCGTGAAGGATCTCAACCTGGACATTCGCAAGGGCGAATTCCTCACCCTGCTCGGCCCCTCCGGGTCCGGCAAGACCACCAGCCTGATGAT GCTGGCCGGTTTCGAAACCCCCACCGCCGGCGAAATCCTCCTGGCCGGTCGCTCGATCAACAATGTCCCTCCGCACAAGCGCGACATCGGCATGGTGTTC
Amino Acid Sequence
>spermidine/putrescine ABC transporter substrate-binding protein
MTVISFGGANKEAQETAFYKPFKSATGNRVVHGSYNGDLAKLKRMVEISHVSWDVVEVEAPELARGCEEGLFEKLDMAKVGDPADFVPGAVQPCGVGIFV WTTLLAYNPGKVAGSPQGWADFWDVKKFPGKRGLRWGAKYSLEFALMADGVAPKDVYQTLATPAGVERAFRKLDELKPYIHWWKSGQDPVRDLADGTVVM SSAYNGRIAAAQAEKQRLAMVWSGGVYDFDFWALPVGVWKKQLAEEFIRFASQPEQQKAFAENIAYGPANRKAVGLLDPQVAANLPTAPQNMQNAVGMNV AFWAEHGEALEQRFQNWAKR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site