Pseudomonas sp. H1h, U862_RS0128495

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. H1h Contig42, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ATGTCCTCACCTGAATTTGCAGTGCAGGCGCTTTACAGTAGTCATCACGGCTGGCTCAACGCGTGGCTGCGGACGCGGCTGGGCAATGCCGCGGATGCGG CGGATCTGGCGCAGGATACTTTCGTGCGCCTGTTGCAACGCACCGAACGCCTGGAGCTGAAGGCCCCGCGCGCTTTTTTGCGCACCATCGCCCGTGGTCT GGTGATCGACCATTGGCGCCGTGAAGAAATCGAACGCGCCTATCTCGAATCCATCGCCCATTTGCCCGAAGCGCAAATCCCGAGCGCCGAGGCCCGCGCC CTGGTGATCGAATTGCTCGAAAGCATCGCGCGCATGCTCGAAGGCTTGCGCCCGAAGGTGCGACAGGCGTTTCTGCTGGCGCAGTGCGAAGGTTTGACCC ACAAGCAGATCGCCGAACAGATGGGCTTGTCGCTACGCTCGGTGGAACGTTACGTCGCCGATGCGTTGTATCACTGCTACGTGTTGCGGTACGCAAGCTG
DNA Sequence for Gene
>U862_RS0128495
ATGCCTGTGGATAACCTCTCGGCAGGGCGCCGCGCCGAACCGCCGCAACAGGTGGTCAAACAAGCCATTCACTGGCTGCTACGGCTGCGCAACAATCATG GCAATGCTCGCCTGAGTAGCCAGTGCGAAGCGTGGCGCGCCGAACATCATGAACATGAACTGGCCTGGCAGCGCGTGCAGTCGCTGCAGGCCGAGTTGAG CCATAACCTGCGCGCAGTGCCTGGCACTCAGGTGGCATTCAATACACTGGAAAACAGTGCACAGGGGCTCGGCCGGCGACAGGCTTTGAAACTGTTGTCC GGCGCCTTGCTGACAGGCTCCGCCGCCTGGGTAGCCAAGGACACCTCGGCCTGGCAGCAATGGAGCGCCGACTACGCCACGGCGACCGGCGAACGCCGCG GCTTCCAGTTGCCGGACGGCACGCGGATCGAGCTCAATACCGCGAGCGCGGTGGATCTGGATTACACCGCGCAGCAACGGCTGATCAAACTCACTCGCGG CGAAATCATCGTCACTTGCGGCGGCAACGATCAAGGCGCGGCCTTCAACCGAGCGCTTCGCGTGCAAAGTCGTCACGGTACCTATGAACCGACTGATGCC CGCTTCATCCTCCGCCAGGAAAGCGATTGCACGCGGCTGAGCGTCACCACCGGGCGCGTGGCCATCCACAGCGGTGGCACCTCGGTTGAGGCGCTCGCCG GCCAGACTTACCTGATCGATCACCACCGGGTACGCCTGGCACCGCCACCGGATATGGACGCGGGCGCGTGGGTCGACGGTTTGATCGTGACTCGCAATAT GCGCCTGGGCGATTTTCTCAACGAGGTCGCACGTTATCGGCCGGGCTTCGTGACGTGTGCGTCGGCCGTGGCGGATTTGCGCCTGTCCGGCGTGTTTCGC CTGGAGGACACCGACAAGCTGCTGGCCATCCTGCCGCAGACCCTGCCGGTGCAATTGCGTTATCGCACCCGATGGTGGGTCACGCTGGAAGCAGTGGCCT GA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AATTATTTTGGCGGGTTTTCGCGACAAGTCCGGCTTGGTCAGTAAGCACTTCAACTCAGCCTTTGCGACTTCCCACGGAAACCTACAATGACTGTCCGCA TCACCTGTAAGAACCCTCTGAATTTCACTGCCGAATCGGGCCTGCTGCGCCACGCCATTCGCGCCGCCCTGCTCTCCACAGTTTTGGGCGCAGGTGTGCT GCCTGGCCTGAGCCTCGCCGCCAATACCAGTGAAGCGAGCAGTCATCGCTATAACATCGCCGCCGGCCCGCTGGGGGAGGTGCTGAACCAGTTTGCGCGC CAGGCTGGCATCACCCTGTCGATGACCCCACAGCAAACGCAGGAGCGGCGGTCTCCGGGCGTGCAGGGCGAGTATTCAACCGACCAGGCGTTGCGCCATT TGCTCGGGGGCTCGGGCCTTGAAGCAGTGAGCGAGGACGGTAGCAGCTACATTCTGCATTCTGTCAGCGACAGCAACGCACTGGCGCTGCCAACCACCGA
Amino Acid Sequence
>peptide ABC transporter substrate-binding protein
MPVDNLSAGRRAEPPQQVVKQAIHWLLRLRNNHGNARLSSQCEAWRAEHHEHELAWQRVQSLQAELSHNLRAVPGTQVAFNTLENSAQGLGRRQALKLLS GALLTGSAAWVAKDTSAWQQWSADYATATGERRGFQLPDGTRIELNTASAVDLDYTAQQRLIKLTRGEIIVTCGGNDQGAAFNRALRVQSRHGTYEPTDA RFILRQESDCTRLSVTTGRVAIHSGGTSVEALAGQTYLIDHHRVRLAPPPDMDAGAWVDGLIVTRNMRLGDFLNEVARYRPGFVTCASAVADLRLSGVFR LEDTDKLLAILPQTLPVQLRYRTRWWVTLEAVA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site