Pseudomonas sp. H1h, U862_RS0126680

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. H1h Contig31, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGGTAACTGACTTTGATCTGACCGCTGGCCGAGGCCGGGACTTTCACCTCCAGCCCCTGGCGATACACTGGCTGTTCACCGAAAAATTCGTCGCTGTGGG ACTCGCCCTCGGGCAGAACCGGCTGTTGCTCGGCTTTGAGGCCGTCGAATTTCAGACGCTTCTGATACAGGTAGTAGCCGTCGGTAATCTGCCAGAAAAG CTGGGTTTCCCCGGATTCCAGGCGTTCGGAGGTGAGCACGAACGCTTTGTCGACCGGCAGAAATTCCGGTTTGCTCTCGAATGGATTATTTCCCGCCTGG GCCAGGCCGGAGATCAGCAGTGCAAACAAAAGAAAAAAATGACGCATGGAGGAGCCTTGTCCCTGTGCAAGTGTGGGCACAATGGTGGATGGCGATTAAC CGATGATTAAGCGTCACGCCCTTGTCGCTGTTGCGTTGGGCGCCATAATGTCAGCTTAATCGGCCAACGGCCTAATCGGCTTTTTTCTACGGGACTGATC
DNA Sequence for Gene
>U862_RS0126680
ATGCACGTACTGGTTTGCGAAGACGATGAATTGATCGCCAGCGGTATCGTTGCCGGGCTCACAGCCCAAGGCCTCACCGTGGAGCATGTCAATACGGCTT CCAAGGCGCGGGCGATGCTCAAGGTCGCCGAATTCGACGTGATGGTGCTCGACCTCGGCCTGCCCGACGAAGATGGCCTCAAATTGCTGCAACAGTTGCG GCAACAGGGCCTGGAAATTCCGGTGCTGATTCTGACCGCGCGGGACTCGGTGACCGACCGCGTCGATGGTTTGCAGGCCGGGGCTGACGATTACCTGCTC AAACCATTCGATCTGCGTGAATTGTTCGCCCGTTTGCAAACCTTGTTGCGCCGGGTCGCCGGGCGCAGTGTCAACCTGATCGAACATGGCGCGCTGACCT ACGATCCAAGCAGCCGTGAAACCACCTTGGCCGGGCAACCGGTGGACCTGTCGCGGCGCGAGCAATCGCTGTTGCAGGCGCTGTTGCACAATCGTGGCCG GGTGCTGTCCACCGAGCAATTGAAAGACAGCGTCTACGGCTTCAATGACGAACTGGAGAGCAACGCCCTGAACGTGCATATCCATCACCTGCGCAGCAAG CTCGGCAAGGGCATCGTCGAAACCGTTCGCGGTCTGGGTTATCGCCTCGGGCCGGCCGATGGTGGAGAGCAACAGAAGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGAGCCTGCGTCTGCGCCTGAGTCTGACCCTCGGCGCCGCGTTCGCCCTGATCTGGGCCCTGGCCGCGGCCTGGATGCTCAGTGACTTGCGCAATCAGAT GATGTTTTCCCTCGACCAGCGGCTGGTGGCTTCGGCGCGCATGGTCGCCGGGTTGCTGGAGCAACTGCCGGCGTTACCGAGCAAGGGCGAGGGCACCCAT TTCAGCGCCGAACAATTGAACATTCCCGGCGGCATGGCCTGTCAGGTCAGTTCGTTGCGCGGGGAGATTCTTGCCCGCAGCCACAGCAGCCCAGAGCAAA CCCTGGAAGCCGAGAAAATGGGCTTTCACGACCAGATGATCGATGGCGCGCCGTGGCGCAGTTTCACCCTCGCGCGCGGTGACGTGCGGATCACCACGGC CGATCGGCAGATTGAGCGCGAAGCCCTGAACATGTCGATTCTGCTGGCGGCCTCGGTGCCGGTCGGCGTGGCGCTGCTCGGTTGCCTGTGCCTGTTGTGG
Amino Acid Sequence
>transcriptional regulator
MHVLVCEDDELIASGIVAGLTAQGLTVEHVNTASKARAMLKVAEFDVMVLDLGLPDEDGLKLLQQLRQQGLEIPVLILTARDSVTDRVDGLQAGADDYLL KPFDLRELFARLQTLLRRVAGRSVNLIEHGALTYDPSSRETTLAGQPVDLSRREQSLLQALLHNRGRVLSTEQLKDSVYGFNDELESNALNVHIHHLRSK LGKGIVETVRGLGYRLGPADGGEQQK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site