Pseudomonas sp. H1h, U862_RS0125160

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. H1h Contig31, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CAGGTTCGCGGCCTACACGCCAATTCCCCGTTTCACACACAATTTACGCACAGGTTTATCCACAGGTAGTACGTTGCAATCCCCCACCAAAACGCATTAT CTTGTAGCCCGGGCGTAAAAAAACCCTACATGTAGGGTTTGACCCTAAAAAACCAAACACAAACCGGACAGTGAATTCAAGGCTTTTTATTGCCATTGTC GGGTTGAACCAAACGTATTTTCAGAAGCCCAAACCGCGCCTGCGGATGGCTACCGTTTTTCAGTCGACCACGACGATAACGGTACGGGTGTTGCAGTGAC GAACCTGCCCCCGAAAGGAATGCGGTTTCACGCGTATCGCGCGAACCGAAGACTTCGGCATGGAAGCGGCGCCCACAAGGCCCCCTTCCTGAACTGTCCC GAAGTCGTTATGCCCGGCGCGTGCCGGTTGTAGTGCTTCAGGACGGAACGGTGGGCACCTTGATGGTGCCCAAACAAACATAGAGAACGTGGAGACACCC
DNA Sequence for Gene
>U862_RS0125160
ATGCAAACCGACACAACTCGCGAGAACCCGCAGGGCACCTTGCCGCAGGCCGCCGATTCGAATTCGGATCTGGCCGCCACCGCGCCTGGTCAACTGCGCG TGATCAAGCGTAATGGCACTGTCGTTCCTTACACCGATGACAAGATCACCGTCGCTATCACCAAAGCGTTTCTCGCAGTTGAGGGCGGCACTGCTGCCGC TTCGTCGCGAATCCACGACACCGTTGCCCGCCTGACCGAACAAGTCACCGCGACCTTCAAGCGTCGCATGCCTTCGGGCGGCACCATCCACATCGAAGAA ATCCAGGACCAGGTCGAACTGGCCCTGATGCGTGCCGGCGAGCAGAAAGTTGCCCGCGACTACGTGATCTACCGCGACGGTCGTTCGAAAGAACGTGCTG CCCACGCCCCGGTCGAAGAAGCAGTCAACGCGCACCCGTCGATCCGCATCACCCGTGCCGACGGCAGCCTCGCGCCGCTGGACATGGGCCGCCTGAACAC CATCGTCACCGAAGCCTGCGAAGGCCTGGCTGAAGTCGACGGCGACCTGATCCAGCGCGAAACCCTGAAAAACCTGTACGACGGCGTGGCCCTGACCGAC GTCAACACCGCGCTGGTGATGACCGCTCGCACTCTGGTTGAACGTGAGCCGAACTACTCGTTCGTCACCGCCCGCCTGCTGATGGACACCCTGCGCGCCG AAGGCCTGGGCTTCCTCGAAGTGGCCGAAAGCGCCACTCACCACGAAATGGCCGACCTGTACGCCAAGGCACTGCCGGCCTACGTCGCCAAAGGTATCGA GTTCGAACTGCTGAACCCTGTGCTGGCCACCTTTGACCTGGAAAAACTGGGCAAGGCGATCAACCACGAGCGCGATCAGCAATTCACCTACCTGGGCCTG CAAACCCTGTACGACCGTTACTTCATCCACAAGGATGGCGTGCGTTTCGAACTGCCGCAGATCTTCTTCATGCGCGTGGCCATGGGCCTGGCGATCGAAG AGAAGAACAAGGAAGAGCGTGCGATCGAGTTCTACAACCTGTTGTCGTCCTTCGACTACATGGCGTCGACTCCGACCCTGTTCAACGCCGGCACCCTGCG TCCACAACTGTCGAGCTGCTACCTGACCACCGTTCCGGATGACCTGTCGGGCATCTACCACGCGATCCACGACAACGCCATGTTGTCCAAATTCGCTGGC GGCCTGGGCAACGACTGGACGCCTGTGCGTGCTCTGGGCTCGTACATCAAGGGCACCAACGGCAAATCCCAAGGCGTGGTTCCGTTCCTCAAAGTAGTGA ACGACACCGCTGTAGCCGTTAACCAGGGTGGCAAGCGCAAGGGCGCTGTGTGTGCCTATCTGGAAACCTGGCACATGGACATCGAAGAGTTCATCGAGCT GCGCAAGAACACCGGTGATGATCGTCGTCGTACCCACGACATGAACACCGCCAACTGGATCCCTGACCTGTTCATGAAGCGCGTCTTCGATGACGGCAAG TGGACCCTGTTCTCGCCATCCGAAGTACCGGACCTGCACGACCTGACCGGTAAAGCCTTCGAAGAGCGCTACGAGTACTACGAAGCCCTGACCGAATACC CGGGCAAGGTCAAGCTGTTCAAGACCATCCAGGCCAAAGACCTGTGGCGCAAAATGCTCTCCATGCTGTTTGAAACCGGCCACCCATGGCTGACTTTCAA AGACCCGTGCAACCTGCGCAGCCCGCAGCAGCACGTCGGCGTGGTTCACAGCTCGAACCTGTGCACCGAGATCACCTTGAACACCAACAAGGACGAGATC GCCGTTTGCAACCTGGGCTCGATCAACCTGCCGAACCACATCGTCGACGGCAAGCTGGACACCGCCAAGCTGCAACGCACCGTGAACACCGCCGTGCGCA TGCTCGATAACGTGATCGACATCAACTACTACTCGGTGCCGCAAGCGAAGAACTCCAACTTCAAGCACCGTCCGGTCGGTCTGGGCATCATGGGCTTCCA GGACGCCTTGTACCTGCAGCACATTCCTTACGGTTCCGACGCTGCCGTCGAGTTCGCCGACAAGTCGATGGAAGCGGTCAGCTACTATGCGATCCAGGCT TCCTGCGACCTGGCTGACGAGCGCGGCGCGTACGAGACATTCAAAGGCTCGCTGTGGTCCAAAGGCATTCTGCCGCTGGATTCGCAACAGATCCTGATCG AGGCTCGTGGCCAGAAGTACATCGACGTTGACCTGAACGAAACCCTGGACTGGGCACCGGTTCGCGCCCGTGTACAGAAAGGCATTCGTAACTCCAACAT CATGGCCATCGCTCCGACCGCCACCATCGCCAACATCACTGGCGTCTCGCAGTCGATCGAACCGACCTACCAGAACCTGTATGTGAAATCGAACCTGTCG GGCGAATTCACCGTGATCAACCCGTACCTGGTTCGCGACCTCAAGGCTCGCGGCCTGTGGGACTCGGTCATGATCAACGACCTGAAGTACTACGACGGTT CGGTTCAACAGATCGAGCGCATCCCGCAAGAACTCAAAGAGCTCTACGCGACCGCGTTCGAAGTGGACACCAAGTGGATCGTTGACGCCGCCAGCCGCCG TCAGAAGTGGATCGACCAGGCCCAGTCGCTGAACCTGTACATCGCCGGCGCATCGGGCAAGAAGCTCGACGTGACCTACCGCATGGCCTGGTACCGTGGC CTGAAAACCACTTACTACCTCCGTGCCCTGGCCGCGACCAGCACCGAGAAATCGACCATCAACACCGGCAAGCTGAACGCTGTTTCCAGCGGCGGCAACC ACGGCGACGATTCGGTTCTGGCAGCGCCTGCCGGTCCGGCGCCAGTGCCAAAGGCTTGCGCGATCGACGAGCCGGATTGCGAAGCTTGCCAATAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCTGAGCTGAATCAGGCGTTGCGAGACGCCTGATACATTCCAGGCAAAAGAAAACCCCCGACAGACTTCTGGTTTGTCGGGGGTTTTTCTTTTGCTCCGT CAAAAAACAGCGAAACCCGGTGACAGGCTTCGCCGTTAATTATTAAGGCAAGCTAACTTCAGACCATAAACGACCCGGCCATTGCCTGCCCCACAACCGG AATGGTGAACGTCTCACCATTGGCTGTCGCAAAGGTTTCGATGGTGTTTGAACCCGCATACCAGTCAGCAAGAATCACTGCGTTGTTCTGCTTGCCCGCA TTCCACTCCACGGCGTTGAAGATGTAGGCATTGGTACCGTCGGTCTTGATGATCACATCCGCATACGACTTGATATTCGTCAGCTCGACTTTATCGCCAC CCTGAAGGCCATCATCCTTGATCATCACATTGGTCGAGGAATACACCTTGTAGGTATCGCTGCCTTCACCCCCGTAGGCGAAACCACCGCCGAGCATAAT
Amino Acid Sequence
>ribonucleotide-diphosphate reductase subunit alpha
MQTDTTRENPQGTLPQAADSNSDLAATAPGQLRVIKRNGTVVPYTDDKITVAITKAFLAVEGGTAAASSRIHDTVARLTEQVTATFKRRMPSGGTIHIEE IQDQVELALMRAGEQKVARDYVIYRDGRSKERAAHAPVEEAVNAHPSIRITRADGSLAPLDMGRLNTIVTEACEGLAEVDGDLIQRETLKNLYDGVALTD VNTALVMTARTLVEREPNYSFVTARLLMDTLRAEGLGFLEVAESATHHEMADLYAKALPAYVAKGIEFELLNPVLATFDLEKLGKAINHERDQQFTYLGL QTLYDRYFIHKDGVRFELPQIFFMRVAMGLAIEEKNKEERAIEFYNLLSSFDYMASTPTLFNAGTLRPQLSSCYLTTVPDDLSGIYHAIHDNAMLSKFAG GLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDTAVAVNQGGKRKGAVCAYLETWHMDIEEFIELRKNTGDDRRRTHDMNTANWIPDLFMKRVFDDGK WTLFSPSEVPDLHDLTGKAFEERYEYYEALTEYPGKVKLFKTIQAKDLWRKMLSMLFETGHPWLTFKDPCNLRSPQQHVGVVHSSNLCTEITLNTNKDEI AVCNLGSINLPNHIVDGKLDTAKLQRTVNTAVRMLDNVIDINYYSVPQAKNSNFKHRPVGLGIMGFQDALYLQHIPYGSDAAVEFADKSMEAVSYYAIQA SCDLADERGAYETFKGSLWSKGILPLDSQQILIEARGQKYIDVDLNETLDWAPVRARVQKGIRNSNIMAIAPTATIANITGVSQSIEPTYQNLYVKSNLS GEFTVINPYLVRDLKARGLWDSVMINDLKYYDGSVQQIERIPQELKELYATAFEVDTKWIVDAASRRQKWIDQAQSLNLYIAGASGKKLDVTYRMAWYRG LKTTYYLRALAATSTEKSTINTGKLNAVSSGGNHGDDSVLAAPAGPAPVPKACAIDEPDCEACQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site