Pseudomonas sp. H1h, U862_RS0123535

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. H1h Contig30, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TTGCCCGTTTCGACGCTGATCTGGCGTTGTCGGTGGCGCAATACGACAAGATCATCGACCGCGAATACAAGACGGCCCTGCGTGAGCTGGCAACCTACAT GATGGAAGACCCGCGCTCTATCTCGCGGGTTCTGAGCATCATCTGGGTGCTGCGTTCGCTGGAGCGGATTGGCGACCATGCGCGCAACATCTCGGAACTG GTGATCTACCTGGTGCGCGGGACCGATGTGCGGCACATGGGCCTCAAGCGCATGAAAGAAGAAGTTGAAGGCACAAGCGGCGAAACCGCTAATGTTCCGG GCGATGCTGACGATAAGTAAGATTGCCTGAGAAAAGCGCCCGGCCCTTTGGCCGGGCGTTTTTGTTTATGGCGCTTGAGTCAGGAAATCGAATTGAAAAG CAGCACCCGCGAACGAAAAGTCCCGGCGTGACTGAAGATTGTTGGCAATGTGCCATCAGCAAAAGCGGTATGCTTGCCGGGATTTTTATAGGGGTGTTGG
DNA Sequence for Gene
>U862_RS0123535
ATGAGCAAGATCAGTGTGTTGGTCGTGGACGACGCTTCGTTCATTCGCGACCTGGTGAAAAAGTGCCTGCGTAACTACTTCCCGGGGATTCGCACCGAGG ATGCCATCAACGGCAAAAAGGCCCAGGCGATGCTGGCCAAGGAAGCGTTCGACCTGGTGCTGTGCGACTGGGAAATGCCGGAAATGTCCGGTCTCGAACT GCTGACCTGGTGCCGCCAGCAGGACAACCTCAAGTCCATGCCGTTCATCATGGTCACCAGCCGTGGCGATAAAGAGAACGTGGTGCAGGCGATTCAGGCT GGCGTTTCCGGCTATGTCAGCAAACCGTTCACCAACGAGCAACTGCTGACCAAGGTCAAGCAGGCGCTGAACAAGGTCGGCAAGCTCGACACCCTGATGA ACAGCGCGCCGACCAAGATGAACTCGGCGTTCGGCAACGACTCCCTGAGCGCGTTGACCGGCGGCAAGCCTGCCGTGGTGGGTGGCGCTCCGGCAGCTGC TGCAGTCAACCCGTTCGCCAAGCCTGCGGTCGCTGCACCAACGCCTGCCGTTGCGCCATCGCGTGGCTTGCTCAACAGCCCGCCGGTGCAGGCACCGGCA GCCTCGAAAGCCCCCGTCGGTGGTCGTGGTCAGGGCCAGTTGCGCCTGCCGAGCGGCAACCAGCAATGCGTGATCAAGGCCCTGAGCATCAAGGAAGCGC TGTTGGTGGTGAAGCGCACCGAGACCCTGCCGCAGATCCTCGACAGCGCCGTGCTCGACCTGGAGCAGGGCGACAACGCTGAAATCGCCCGTCTCAACGG TTACCTGCATGCCATCGTCGCCCACGAGCAGAAAGCGGACAGCGACTGGCTGCAACTGACCTTCCGCTTCGTCGACCAGGACGCGCAGAAGCTCGACTAC ATCTCCCGCCTGATCGCCCGCGGCACGGCGCAGAAGCACTTCGTTCCGGGCGCGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TTTTCGTCGCCTGACAGTCCGCTTTCCGAGCAGGCTCGCTCCCACATTGGAATGCATTTCAAAGGTGGGATCGGACTTGCTCGCTAAGGGGCCATCACTT GCACCATCAACCTCCCAGACTGCCCAATTTGAAACATCTGTCGACTAGCCTGGTCTGTCTCACCTGCTAGGCTCATTTCCAGGCCTTCCTTCGACAGACT CTTGCCCATGCTCGCGCGCCTGCTGTTTTTCTGTGGTCTTTTCATGGCCTCCACCTCGGCTGTGGCCATGACGATCTACAAATCCACCGATGCCAACGGC GTGGTCTCGTACAGCGACCGGCCGAGCAAAGGCTCGCAGGTGTTCGTGTTTCAGGACCGCATGGTCGAGCACCTGGAGCGCCAGGTGTATCTCGACATCA AGAAGCAGAAGGGCACCGATGTGGTGTTTGTGCGCAACGATCTGTACGCACCGGTCGAGGTCGCACTGGCATTTACCGGAATGAGTAACGTACGTGGCGC
Amino Acid Sequence
>chemotaxis protein CheY
MSKISVLVVDDASFIRDLVKKCLRNYFPGIRTEDAINGKKAQAMLAKEAFDLVLCDWEMPEMSGLELLTWCRQQDNLKSMPFIMVTSRGDKENVVQAIQA GVSGYVSKPFTNEQLLTKVKQALNKVGKLDTLMNSAPTKMNSAFGNDSLSALTGGKPAVVGGAPAAAAVNPFAKPAVAAPTPAVAPSRGLLNSPPVQAPA ASKAPVGGRGQGQLRLPSGNQQCVIKALSIKEALLVVKRTETLPQILDSAVLDLEQGDNAEIARLNGYLHAIVAHEQKADSDWLQLTFRFVDQDAQKLDY ISRLIARGTAQKHFVPGA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site