Pseudomonas sp. H1h, U862_RS0123450

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. H1h Contig30, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GACGGCCTGCTCGACGGCGGCATCCAAGGCCTGGTGCTGGAGTGCTACGGCAGCGGCACAGGACCGAGCGACAATCCCGAGTTCCTCGAAAGCCTTGGCC GCGCGCGGGACAACGGTGTGGTGGTGGTCGCAGTCACGCAGTGCCACGAAGGCGGCGTCGAGCTGGATGTTTACGAAGCCGGCAGCCGGTTGCGTGGCGT TGGTGTGCTGTCCGGTGGCGGCATGACCCGCGAGGCGGCGTTCGGCAAGTTGCAGGCGTTGCTGGGTGCAGGCCTGGAATCGGCTGAAGTGCGCCGACTG ATCGAACTGGACCTGTGTGGCGAGTTGATCTGACCCCACACACTCCCCCTGTAGGAGCGGGCTTGCGCGCGAAGGCGTCAGGTCAGACAGGCTGATGTCG ACTGACACGACGCTTTCGCGAGCAAGCCCGCTCCCGCAATGGGATCTGCGTCCGGCATGTAACTTGCTGCGCTCCAGCCATCCCCAGGCTGGAAGATCGT
DNA Sequence for Gene
>U862_RS0123450
ATGCTGCACTCCCACCTCACCACCCTCAATGCCGTCTCGCTGATCCTCAACACCTTCAAGACCGAGGGCCTTTGCGGTGACGCGCTGCTGGCCGGCAGCG GCATCAGTGCCGCGGACCTGAACCGCGCCGACACGCGCATCACCACCAATCAGGAAATGCAGGTCTGCGCCAACGCGGTCGCGCTCAAGCACGACATCGG CCTTGAACTGGGCCGACGCATGCACGTGTCCTGCTACGGCATCCTCGGTTACGCGCTGCTGACCTGTGCCACCTTCGGTGACGCTTTGCGTCTGGCGATT CGTTATCCGGCGCTGTTGGGAACACTTTTCGAACTGAGCCTGGAAGACGATGGCGAGCGCATCTGGTTCGTCGCCGCCGATTACCGCGAGAGCCCGGCGA TGGCAGTGTTCAACGCCGAGTTCTGCCTGGTGTCGCTGAAAGTGATTTGCGACGACCTGCTCGGCCATCCCCTGCCCTTGCTCGCCACGCGGTTCGAGCA CGCGGCGCCGGATTACCGCGACAGCTACGCCGAACACTTCGACAGCCCGCTGCACTTCGCCGCCCGGGACAACGCGTTCGCCTTCGACCGCTGCTGGCTC GAACAGCCGCTGCCGCTGGCCGACGCCATCACCCATCAGGCCATGGCCGAGCGCTGCCGCAAACAGAACCTCGAATTTACCGGCCGCCAGGCCTGGCTCG GGCGTATCCGCCAGTTGCTCAGCGCTCAACTGAATGCCGCGCCGGGGCTGGAAGGCCTGGCCCAGCAGATGAAATGCTCGCCGCGCACCCTGCGCCGCCA CCTCAAAGACATGGGCAGCAGTTATCAGGAGCTGCTCGACGAACTGCGTTTCGAGCGCGCCAAGCAGATGCTGTGTGAGGATCAGTTGCCGATCTACCGC ATCGCCGAGACGCTGGGCTTCAGCGAAACCGCGAGTTTCCGCCACGCGTTCGTACGCTGGAGCGGTGTGGCGCCGAGCCAGTTTCGCCCGCACTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TATCCCACATTGGAAGGCGGGCGCTCAGCGATTTGCTGCCATGCACGGAGTCCTGTGGGAGCGGGCTTGCTCGCGAAGGCGTCGTGTCAGTCGTCATCAA TGCATCTGACACACTGTATTCACGAGTAAGCCCGCTGCCACAAGTAACGCATTCCATGCCTTGAATCGAGGCATGGCTGCATTGAAAAGGGGCGAATTTC GGTCAGATCTTTTGGCCATATCGATCCCCTTTTGGCCTTTCCTGCCGTTCTCCGATTCGCCGCGCGCCGCAACACTGGGGACAACCGAATCAGCCCTGCG GAGAACAACAAATGCTGACGATCTACTCAGACGATCACCACCTGCACCATGGCCGCTGCGAACTCATCGACGGCCAGCTCAAGCCATGTTTCGAAATGCC CTCGCGCGCCGACCACGTGCTGCAACGGGTCAGAAACCAGAACCTCGGCGCAGTCGAAGCGCCGAAGGATTTCGGCCTCGAGCCGATCGCACGGATCCAT
Amino Acid Sequence
>AraC family transcriptional regulator
MLHSHLTTLNAVSLILNTFKTEGLCGDALLAGSGISAADLNRADTRITTNQEMQVCANAVALKHDIGLELGRRMHVSCYGILGYALLTCATFGDALRLAI RYPALLGTLFELSLEDDGERIWFVAADYRESPAMAVFNAEFCLVSLKVICDDLLGHPLPLLATRFEHAAPDYRDSYAEHFDSPLHFAARDNAFAFDRCWL EQPLPLADAITHQAMAERCRKQNLEFTGRQAWLGRIRQLLSAQLNAAPGLEGLAQQMKCSPRTLRRHLKDMGSSYQELLDELRFERAKQMLCEDQLPIYR IAETLGFSETASFRHAFVRWSGVAPSQFRPH
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site