Pseudomonas sp. H1h, U862_RS0119840

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. H1h Contig23, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GTGCTGGCTGAAGTGCTGTTGCAGGCAGCCGAGCGCGGCGAGCGACTGGCGGACGTGAAGGTGCTGAGCCGCTATGAACGTCGGCGCATGCCGCACAACC TGGCGCTGATGGCGGCGATGGAGGGCTTCGAGCGTTTGTTCCAGGCGGACCCATTGCCGGTGCGCTGGCTGCGCAATGCCGGGTTGAAGCTGGTGGAGCA GATGCCGGAGGCCAAGGCTCTCTTTGTTCGTGAAGCACTTGGCCTTACAGGCGACCTTCCGGCGCTCGCCAAACCCTGACATCTTCATTGAGGCTGATGA CCTCCTCGCGAGCAGGCTTACTCCTGCATGGGAACGCATTCCGACTGTAGGGGTGAGCCTGCTCGCGATGGCGTCCGTCCATTCACCGCAGTTTCGGAAC TGTGCAACATCTGGTAACTCCTTGGAAAAGAGTTCGATTGAGGTGGTAAATGTGAGTCCTTATCATTTGGCTCACATTTTCCGACCCAGAGATCACTCCC
DNA Sequence for Gene
>U862_RS0119840
ATGTTGGCACCCAAGCGTCTTCTGACCGCACTGGCCCTGACCCTGATCGGCAGCACCACCGCCCAGGCCGCCGACGAGGTGGTGGTCTACTCCTCGCGTA TCGATGAACTGATCAAGCCGGTGTTCGACGCCTACACCGCGAAAACCGGGGTGAAGATCAAGTTCATCACCGACAAGGAAGCGCCGCTGATGCAGCGCAT CAAGGCTGAAGGTGAAAACGCCACCGCCGACCTGCTGCTCACCGTCGATGCCGGCAACCTCTGGCAAGCCGAGCAGATGGGCATCCTGCAGCCGTTCACC TCGAAGACCATCGACGCCAACATTCCTCTGCAATATCGCTCCTCGACCCATGCCTGGACTGGCCTGAGCCTGCGCGCGCGGACCATCGCCTATTCCACCG AGCGCGTGAAACCGGGCGAGTTGACCACCTACGAAGCGCTGGCCGACAAGAACTGGGAAGGGCGCCTGTGCCTGCGCACGGCGAAGAAGGTCTACAACCA GTCGCTGACCGCGACCATGATCGAGGTGCACGGCGCCGAGAAGACCGAGAAGATCCTCAAGGGCTGGGTCAACAACCTGTCCACCGACGTGTTCTCCGAC GACGTTGCGGTGCTGGAGGCGATCGACGCCGGTCAGTGTGATGTCGGCATCGTCAACACCTACTACTACGGTCGCCTGCACAAGCAGAAACCGGAGCTGC CGGTGAAACTGTTCTGGCCGAATCAGGCCGATCGCGGCGTGCACGTCAACCTGTCGGGCATCGGCCTGACCAAACACGCGCCGCACCCGGAAGCGGCCAA GGCGCTGGTGGAGTGGATGACCACGCCGGAGGCGCAGAAGATCTTCGCCGACGTGAACCAGGAATTCCCGGCCAACCCGGCGGTGAAACCTTCCGAGGAA GTGGCAGCGTGGGGCAAGTTCATTGCCGACACCTTGCCGGTGGAAGTGGCGGGCAAACGCCAGGCAGAGGCGATCCGGATGATGGATCGGGCGGGCTGGA ACTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTCTCTTCCGATAGGCTCGACTGCTTCAAGATCCAGTCCCTCTCCCCAAGGGAGAGGGCAACAATCCCAACCTGAAATACTCAATCCAAGATCACCCCAA TCCCTCCAGAGATTCAAAAGTGGCCCACCCCGCTCAACGCCGCTGGTACCCCATCGTCTGCGCCATCGCTGCGCTGGTGCTGTTGCCTCTGAGTGTTCTG CTGTTGTCGTGGCAAACCATCGATCAGCAGATCTGGTCGCACCTGTGGGAAACCCAGCTGCCGCGCCTGCTGGGCAACACTCTGACGCTGGTGCTTGGCG TGGGCGTCGGCGTGACGCTGCTCGGTGTCAGTCTGGCGTGGCTTACCAGCCTCTGCGAGTTTCCCGGCCGTCGCTGGCTCGACTGGGCGCTGATGCTGCC ATTTGCCATTCCTGCCTATGTGCTGGCGTTCGTCTTCGTCGGTCTGCTGGACTTCGCCGGCCCCGTGCAAACCCTGCTGCGTGAGTGGTTCGGCAGCGGT
Amino Acid Sequence
>iron ABC transporter substrate-binding protein
MLAPKRLLTALALTLIGSTTAQAADEVVVYSSRIDELIKPVFDAYTAKTGVKIKFITDKEAPLMQRIKAEGENATADLLLTVDAGNLWQAEQMGILQPFT SKTIDANIPLQYRSSTHAWTGLSLRARTIAYSTERVKPGELTTYEALADKNWEGRLCLRTAKKVYNQSLTATMIEVHGAEKTEKILKGWVNNLSTDVFSD DVAVLEAIDAGQCDVGIVNTYYYGRLHKQKPELPVKLFWPNQADRGVHVNLSGIGLTKHAPHPEAAKALVEWMTTPEAQKIFADVNQEFPANPAVKPSEE VAAWGKFIADTLPVEVAGKRQAEAIRMMDRAGWN
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site