Pseudomonas sp. H1h, U862_RS0118715

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. H1h Contig20, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TATTACTTCATTTACGCGGTGTTGTTCCTGGTGGTGCTGGCTGTGCTGTACATCAAGCATCGTCTGGTGAAGATGCCGGTAGGCCGCGCCTGGGAAGCTT TGCGTGAAGACGAAATCGCCTGTCGCTCGATGGGCCTCAATCACGTGCTGGTCAAACTCTCGGCGTTCACTATTGGAGCATCGACAGCCGGTCTGGCCGG GGTGTTCTTCGCCACCTATCAAGGCTTCGTCAACCCGACCTCGTTCACCTTCTTCGAATCGGCGCTGATCCTCGCCATCGTCGTGCTCGGCGGTATGGGT TCGACCATCGGCGTGGTGATCGCGGCGTTCGTGCTGACCGTTGCCCCGGAACTGCTGCGCGGCTTCGCTGAATACCGCGTGCTGCTGTTCGGCATCCTGA TGGTGTTGATGATGATCTGGCGACCACGCGGGCTGATCCGCATCAGCCGTACCGGGGTCACTCCACGCAAAGGTGCCATTCACTATGAGAGGACTGCGCC
DNA Sequence for Gene
>U862_RS0118715
ATGAGTGAAGTCGTACTCTCTGTGGAAAAACTGATGATGCACTTCGGTGGCATCAAGGCCCTGAGCGATGTCAGCCTCAAGGTCAAACGCAACTCGATCT TCGCCCTGATCGGCCCCAACGGCGCAGGCAAGACCACCGTGTTCAACTGCCTGACCGGCTTCTACAAGGCCTCTGGCGGCAAGATCGAACTCAACGTGCG CGGCCAGCAGACCAACGTCATCAAACTGTTGGGCGAGTCGTTCAAACCGACCGATTTCGTTTCGCCGAAATCCTTCCTCAGTCGCCTGTACTACAAGATG TTCGGCGGTACGCACCTGGTGAACCGTGCTGGCCTGGCCCGGACGTTCCAGAACATTCGCCTGTTCAAGGAAATGTCGGTGCTGGAAAACCTGCTGGTGG CCCAGCACATGTGGGTCAACCGCAACATGCTGGCCGGCATCCTCAACACCAAGGGCTATCGCAAGGCCGAAAGCGACGCGCTGGATTGCGCGTTCTACTG GCTGGAAGTGGTGGATCTGGTGGACTGCGCCAACCGCCTGGCCGGTGAGCTGTCCTACGGCCAGCAACGCCGTCTGGAAATTGCCCGGGCCATGTGCACG CGACCGCAGATCATCTGCCTCGACGAACCGGCCGCCGGCCTCAACCCTCAGGAAACCGAAGCGCTGAGCGCGATGATCCGGCTGCTGCGCGACGAGCACG ATCTGACCGTGGTGCTGATCGAACACGACATGGGCATGGTAATGAGCATTTCCGACCACATCGTGGTGCTGGATCACGGCGTTGTCATCGCCGAGGGCGG CCCCGAGCAAATCCGTCACGATCCGAAAGTGATTGCCGCCTACCTGGGCGCCGACGAAGAGGAGCTGGTATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCCGACCGATCCTCGAACTCAAAGACCTCGACGTGTTCTACGGTCCGATCCAGGCCCTCAAGGGCGTATCGCTGCAGATCAACGAAGGGGAGACCGTGAG CCTGATCGGTTCCAACGGCGCGGGCAAATCCACGCTGCTGATGTCGATCTTCGGCCAGCCACGGGCCGCGGGCGGGCAGATCCTTTATCAAGGCGTCGAC ATTACCCACAAGTCATCGCACTACATCGCCTCCAACGGCATTGCGCAGTCGCCTGAAGGGCGGCGGGTGTTCCCCGACATGACCGTCGAGGAAAACCTGC TGATGGGCACCATCCCGATTGGTGACAAGTATGCCAAGGAGGACATGCAGCGCATGTTCACGCTGTTCCCGCGGCTCGAAGAGCGCCGCACTCAGCGGGC GATGACCATGTCCGGCGGCGAGCAGCAGATGCTTGCCATTGCCCGGGCATTGATGAGTCGGCCAAAGCTGTTGCTGCTCGATGAACCGAGCCTGGGCCTG
Amino Acid Sequence
>ABC transporter
MSEVVLSVEKLMMHFGGIKALSDVSLKVKRNSIFALIGPNGAGKTTVFNCLTGFYKASGGKIELNVRGQQTNVIKLLGESFKPTDFVSPKSFLSRLYYKM FGGTHLVNRAGLARTFQNIRLFKEMSVLENLLVAQHMWVNRNMLAGILNTKGYRKAESDALDCAFYWLEVVDLVDCANRLAGELSYGQQRRLEIARAMCT RPQIICLDEPAAGLNPQETEALSAMIRLLRDEHDLTVVLIEHDMGMVMSISDHIVVLDHGVVIAEGGPEQIRHDPKVIAAYLGADEEELV
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site