Pseudomonas sp. H1h, U862_RS0118470
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. H1h Contig20, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCCCGGAAAACTGCGGCTGAACAAACTCGACAGGCTCTTCATCAAAACTCCAGCCATACGACCAGAGTACGCCGACATAGTAGTCGAACCATTCACCTGG ATTCTTATCGCTGTCATAAAGCTTATTCGCCTTGAAGGAGGCGAGAAATATGCAGTTATTGAAAAAGTTTCTGTCGACTACCGCCTGCTTTTCAAAGCCG GTCACCAACGTATCGTTCATTACTACTGCATGCCAACTGCCCGCTTCCATGCGCAACTCAGTATCCATACTGATTCTTTCCCTATTAAATAAAATAAAAC ACACTGAAAGCCCAAGAGTATTCAGAACTTCAAAATCTCAACCAAGGCAAACTAACAAAGTTGAAGCCTCGAATAATTGATTTTTATAAACCTCATGTAT CTGGTGCGTTCCTCCCTTCGCCACCGATAGACCTGAGTCAGATCAAAGCCACCGCGCTATCATGTCGACCTTCAAGATGTACTCGGAACAGAGGAACGGC
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| DNA Sequence for Gene |
>U862_RS0118470
ATGACACCCTGGCTGACGGTTGTGGGAATCGGTGAGGACGGCTTCAAGGGCCTGGGCAAAAACGCCCGGCGTGCCCTGCTGGGCGCCGCGCGGATCATTG GCGGCCAGCGACAGCTGGACTTGCTGCCAGTGTGCATTCGCGGCGCACGCGAATTGTGGCCGAGCCCGTTTTCCCTCGCGCCGGCATTGGCGCGCCGTGG CGAAGCGGTCTGCGTGCTCGCCAGCGGTGATCCGATGTTCTATGGCGTCGGCGCGAGCCTGGCGCGGCAGGTGCCGAGCGACGAGATGCTGATCCTGCCT GCGCCGTCTTCCTGTGCGCTGGCAGCGGCTCGCCTCGGCTGGCCGCTGCAAGAAATCGTAACGCTGTCGCTGGTGGCCCGGCCATTGGCCGCGCTGAATG CACAGTTGTCCAGCGGTGTGCGCCTGTTGTTGCTGAGCAATGACGGGCTGAGCCCGGCAGCGGTCGCGGCGTTGTTGCGCGAGCGCGGTTTTGGCGGCAG TCGCATCAGCGTTCTGGAGCATCTGGGCGGCGATGCCGAACGGCGCACCGACGGCATCGCCAATGACTGGAGCGACCCGCCGATTGCCGATCTGAATGTG ATCGCCATCGAATGCCTGGCCGACGCCGAGGCTCCACGGCTGTCGCGACTCGCGGGCCTGCCCGACTCGGCCTTCCGCCACGACGGCCAACTGACCAAGC GTGACGTGCGCGCGATCACCCTCGCCCGCCTCGCCCCGACGCCCGGTGAACTGCTCTGGGACGTCGGCGCCGGCAGTGGCTCGATCGGCATTGAATGGAT GCGCACGCATCCGAGTTGCCGGGCGCTGGCCGTCGAGGCCGATGACGGTCGTCAGCAACTGATCGAACACAATCGCGATGCGCTGGGCGTGCCGGGGCTG CAGCTGATTCGCGGTAAGGCACCGCAGGCCCTCGCCGGGCTGGAGCGCCCCGACGCGATCTTCATCGGCGGCGGCGTGACCCGCGAAGGGGTCTTCGAGA CCTGTTGGGAACAGCTCAAACCCGGTGGCCGGCTGGTCGCCAACGCCGTGACCCTGCAAAGTGAACTCGCCCTGATGAACTGGCGCGAGCGCCATGGCGG CGAATTGACCCGCATCCACGTTGCCCAGGCACAGCCGCTTGGCGAGTTCGACACCTGGCGCCAGGCGCTGCCGATCACCTTGCTCGATCTGGTCAAACCT CTCGATGCGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGAAACCGCCGAACAACCCGCGCCCCTGCGCAGCGGCCTGACCACCGGTAGCTGTGCCACCGCCACCAGCCTGGCCGCCGCACGCCTGCTGCTCGGCGGT GTCTCGGCGGACGCGGTGCAGATCGTCCTGCCCAAGGGCAAGCAGGTGCAGATGCGCCTGGAATTCTGTCGGTTGACCGAGGGCGGCGCCGAAGCCGGAA CGATCAAGGATGCCGGCGACGACCCGGACGTGACCCACGGCGCGTTGCTCTATTCACACGTGCGGCTGCTGGCCGAGCCGGGGGTCCGCTTCATCGCCGG CGCAGGCGTCGGCACCGTGACCCGGCCGGGGCTGGTGCTCGGCGTCGGTGAACCGGCGATCAATCCGGTGCCGCGCAAGATGATCGGCGATCACCTGAAC CTGCTTGCCGCCCAAAGCGGTTACGCTGGCGGCTTCGAGGTCACGGTCAACGTCGAGGGCGGTGAAGCGCTGGCGCTGAAAACCATGAATCCGCGTCTGG
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| Amino Acid Sequence |
>precorrin-6Y C5,15-methyltransferase
MTPWLTVVGIGEDGFKGLGKNARRALLGAARIIGGQRQLDLLPVCIRGARELWPSPFSLAPALARRGEAVCVLASGDPMFYGVGASLARQVPSDEMLILP APSSCALAAARLGWPLQEIVTLSLVARPLAALNAQLSSGVRLLLLSNDGLSPAAVAALLRERGFGGSRISVLEHLGGDAERRTDGIANDWSDPPIADLNV IAIECLADAEAPRLSRLAGLPDSAFRHDGQLTKRDVRAITLARLAPTPGELLWDVGAGSGSIGIEWMRTHPSCRALAVEADDGRQQLIEHNRDALGVPGL QLIRGKAPQALAGLERPDAIFIGGGVTREGVFETCWEQLKPGGRLVANAVTLQSELALMNWRERHGGELTRIHVAQAQPLGEFDTWRQALPITLLDLVKP LDA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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