Pseudomonas sp. H1h, U862_RS0118370

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. H1h Contig20, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGAGCTTTGCCATGCTCGACATCGACCATTTCAAGCGGGTCAACGACAGCCACGGTCACCCGATGGGCGACCGGGTAATCAAGAGCCTGGCGCTGTTCCT CAAGCAACGCCTGCGCAAGACCGATTTCATCGGCCGTTACGGCGGCGAAGAGTTCGCCATCGTCATGCCCGACACGGATATAGAAGCGGCGCACAAAGTG CTCGACGAGATCCGTCAGCGCTTCGCCGAGATCCACTACCCGGCCCAGCCGCAGGATTTGTGGTGCACCTTCAGCGCCGGCGTGGTGGAAATGCGCGAGG ACTCTGACAGCCTGATGATGGCCAGCCAGGCCGACGAAGCGCTGTACCGCGCCAAGGGTGCCGGACGCAATCGCGTGCAGACCGCGCGCGACTCAAAGCA AAGTGCCACTTTTTCATCGGATTCCACCGATTCGGTCATAACCCTGTAACAGAACCGCAATAAATTCAGGCGCTTACCATTTCTGCCGTTGGTAGCCGTC
DNA Sequence for Gene
>U862_RS0118370
ATGCGCCTGAAGTTGCTCACCAATCTCAACACTCTGCTGCTGGTCGCCGTCTGCGTGGCCCTCGGCGCGACGCTGTGGTGGTCGCAAAAAGCCCTGGAGC GTCCGTATCTGTTGATGGAGCGCTACCTGGGGCTGTCGCAGCAATTTCAGAATGACGTGGCACGCAATGTCGAGGACTACCTCGGCAGCGGCGATGCCTT GCGCCTGAGCAGCGCCAGTCAGGCCATCGACGGTTTGCAGAAAGAACTTGGCGAACTGCCGCCAGCGCTGGCCGAGACCCTGCGCCCGAGCCTGTCGAGC CTTGAAGAATTCAGCAAGACCGACCTGCTCGCGGCCGGCAAACTGGCCGGCGATCCACAAGCGCTGCTGTTGCAGGCCGAACGCGAACTGAGCGCCAGCC TCGACCAGTTGAACACCTATGCCAACGGCAATGCGATGTACCTGACGCCGCTGCTCGCAGCTTCCCAGCATCTGGGCAAGCTGTCGCTGGCTCGCGACAA ACTGGTGAGCAGTGGTCGCAGTGAACTGGCCGCCGACGTCGAACGTGAAGTCGCCAACATCCGCACCCAGGCGCAGGCCATCGACACCCTGCCCCTGCTC GGCGTGGTCGCCAAGAACGAATCCGGCAGTGATGATTTCGCCGCGATGATGGGCATTGCAAGCACTGAAAAAGCCGCTGCCGAAGACGCCGGCGTCGGCC TCAAGCGCGAACTCAACAGCCTGCTGGGGCGTTACCCCGCAGAGCTGGAACGCACCCGCGAGCTGATCCAGAAACGCACCGACCTGAGCACCGCGACGCA CCTGAAGATCGCCGCCGTGCAGCAGGCCATTGCCGGCCTCGAGCCGGTGGTGCGCGCTCAGCACGGGCAGATCCAGGGCGAAGTGCGGTTGATGCAAGGC GTGATGATCGGCCTGATCCTGCTGATTGCGCTGCTGATCGACACCTTGCAACGGCGCCTGGCCCGCACCCTGACCAACCTGGCCCCGGCGCTGTCGACCT GGGCCGAGGGTGATTTCAGTCGCGATATCCATCTGGGCAAAACCAACCGCGAACTGCACGACATCCAAGCGTCGCTCAATCGACTGCGTGCGTACCTGGT GGATCTGGTCGGCACGATTCGCGGCAACGCCGAACAGGTCGCCGGTAGCAGCCGCACGCTGGCCGAGCTGAGTAACGACTTGCACACAGGCGCCGAGCAT CAGGCCGGGGACACCGCGCTGATTCGCGATTCTCTGGGCGAACTGGAAGCCACGATTCAGCAAGTCGCCGGCGATGCGCGTCAGGCCGCGGACGCCAGTC GTCATGCCGGGCTAGCCGTCGAGCACGGGCAAACCGTGATCGGCCAAAGCCTCACCGGCCTGCATGCGCTGGTCGGCGAAGTCCAAGGCAACGCGCAGAT GATCGAGCACCTCGCCGAAGAGTCGGCGACCATTGGCGGCGTGCTGACGGTGATCCGCTCGATCGCCGACCAGACCAACCTGCTGGCGCTCAACGCGGCC ATTGAAGCGGCACGGGCCGGGGAAATGGGCCGCGGTTTTGCCGTGGTGGCCGAGGAAGTGCGCTCACTGGCACAGCGCACGGCGGGCGCCACGGCGGAAA TCCAGACCCTGATCGCCGGCCTGCAAACCGCCGCCCGACAATCGGTCGAAGGCATGCGCGCGCAGGTCGAACACGCCGAAGCCACAGCCAATCAAGCGCA AGCGGCCGACGGCGCGCTGGATAAAATCGTCGGTGCGATCCAGACCATTTCCGACACGGCGATCCGCATCGCCGACGTCACTGCGCAGCAAAGTGGCGCA GTCAGCGAGATCCGCGACCACAGTGAGCGGATCCATCAGTTGGGTGGGGCTAACCTGCTGCGCATCGGCGAAGGTCGGGAACAGGGCGAGAACCTGCTGG TATTGGGCGGGCAATTGCATACCGCCGTGCAGGCATTCCGCGTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TAAACCGCTATCGCGAGCAGGCTCGCTCCCACACTGGAATATGCACCCCTGTGGAAGCGAGCCTGCTCGCGAAGGCGTCAGCACAATCACTACAAGTGAC CGGATCTAATCACTCGGTCACAAATTTCGCGCAAACATCGGTCATCGTGCTGGCTATTGCAGAGAACTGGACAGTCACAAAGCCTTTGCGGCATAGTCGC CGGGTTCTGACGACTGCTCATTCATAACAAGGAACATGCAGATGGCAACCCTACTGGTGCTGCACGGCCCCAACCTGAACCTGCTCGGCACCCGCGAACC CGGCACTTACGGTTCAACGACCCTGGCGCAGATCAATCAGGATCTGGAGCGTCGCGCCCGTGAAGCCGGCCATCACCTGCTGCATCTGCAAAGCAACGCC GAGTACGAATTGATCGACCGCATCCACGCCGCCCGCGGCGAAGGTGTGGATTTCATCCTGATCAATCCAGCAGCTTTTACACACACAAGTGTCGCATTAC
Amino Acid Sequence
>chemotaxis protein
MRLKLLTNLNTLLLVAVCVALGATLWWSQKALERPYLLMERYLGLSQQFQNDVARNVEDYLGSGDALRLSSASQAIDGLQKELGELPPALAETLRPSLSS LEEFSKTDLLAAGKLAGDPQALLLQAERELSASLDQLNTYANGNAMYLTPLLAASQHLGKLSLARDKLVSSGRSELAADVEREVANIRTQAQAIDTLPLL GVVAKNESGSDDFAAMMGIASTEKAAAEDAGVGLKRELNSLLGRYPAELERTRELIQKRTDLSTATHLKIAAVQQAIAGLEPVVRAQHGQIQGEVRLMQG VMIGLILLIALLIDTLQRRLARTLTNLAPALSTWAEGDFSRDIHLGKTNRELHDIQASLNRLRAYLVDLVGTIRGNAEQVAGSSRTLAELSNDLHTGAEH QAGDTALIRDSLGELEATIQQVAGDARQAADASRHAGLAVEHGQTVIGQSLTGLHALVGEVQGNAQMIEHLAEESATIGGVLTVIRSIADQTNLLALNAA IEAARAGEMGRGFAVVAEEVRSLAQRTAGATAEIQTLIAGLQTAARQSVEGMRAQVEHAEATANQAQAADGALDKIVGAIQTISDTAIRIADVTAQQSGA VSEIRDHSERIHQLGGANLLRIGEGREQGENLLVLGGQLHTAVQAFRV
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site