Pseudomonas sp. H1h, U862_RS0115790

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. H1h Contig18, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TACCGCGCGCGAAACGTCTTGAGGATCGGCGGCAGCAGGTTGCCGGCAAACGACGGCATGGCCGCCAGCGTCACCCGCCCGCGTTGCAGGCTGAAGCGCT GGCGCATTTCATCTTCGGCGTTGTCCCAGTCGGCGATCAGACGTCGGGCCAGCGGCAGCAGCGATTCGCCTTCGGCGGTCAGCGCCACGTTCCGCGTATT GCGACTGAACAGGCGCCCGCCCAGGCCCTCCTCCAGCGCCTTGATGGTCAGGCTCAAGGCCGATTGCGACAGGTGCAGGCGCTCGCAGGCCACGGCGAAA CTCAGGCTCTGGGCTACGGCGAGAAAGGCGCGGATCTGTTTGACGGTCATGAACGCTATGCTTCCGTATCAGGATTCAATCAATTATTGAGCTTTATCAA TCAATCGACCTTAAAAATCAACTTAACAAATATATTCTCCAGCGAGACACTCCAGTCATTCGGCTAGCCAGCCGCCCGACAAACAATAAAAGAGGTGCAT
DNA Sequence for Gene
>U862_RS0115790
ATGGCAGGTTTCGACAAGCGCGTGAGTTCCTATGAGGAAGCCATGGCGGGCCTTGAAGACGGCATGACCGTGATCGCCGGCGGCTTTGGCCTGTGCGGCA TCCCGGAAAACCTGATCGCCGAAATCAAGCGCAAAGGCACCCGCGACCTCACCATCGTCTCCAACAACTGCGGCGTCGACGGTTTCGGCCTCGGCGTGCT GCTGACCGACCGCCAGATCAGCAAGGTCATCGCCTCCTACGTCGGCGAAAACAAACTGTTCGAAGAACAACTGCTCAAGGGCGACATCGAAGTCATCCTG ACCCCGCAAGGCACCCTCGCCGAAAAAATGCGCGCAGGCGGCGCCGGCATTCCGGCTTTCTTCACCGCCACCGGCGTCGGCACCCCGGTTGCCGAAGGCA AGGAAGTGCGTGAGTTCAAAGGGCGCAAATACCTGATGGAAGAATCCATCACCGGCGATTTCGCCATCGTCAAAGGCTGGAAAGCCGACCATTTCGGTAA CGTCATCTACCGCCACACCGCGCAGAACTTCAACCCGCTGGCTGCCACCGCCGGCAAGATCACTGTGGTCGAAGTCGAAGAAATCGTCGAACCCGGCGAG CTGGATCCGTCGCAGATCCACACCCCGGGCATCTACGTCGACCGGGTCATTTGCGGCACGTTCGAAAAACGCATCGAACAGCGCACCATCCGCAAATAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TTCAGGCTGACGGAGAATAAAAACATGGCACTTTCCCGCGAACAAATGGCTCAGCGCGTCGCCCGCGAAATGCAGGACGGCTACTACGTGAACCTCGGCA TCGGCATTCCGACCCTGGTCGCCAACTACATCCCCGAAGGCATGGAAGTCATGCTGCAATCGGAAAACGGTCTGCTCGGCATGGGCCCGTTTCCGACTGA AGAAACCATTGATGCCGACATGATCAACGCCGGCAAACAGACCGTGACCGCGCGGATCGGTGCGTCGATCTTCAACTCCGCCGAATCCTTCGCGATGATC CGTGGTGGCCATGTCGACCTGACCGTACTGGGTGCATTCGAAGTGGACGTCGAAGGCAACATCGCCTCGTGGATGATTCCCGGCAAACTGGTCAAGGGCA TGGGCGGCGCCATGGATCTGGTGGCCGGTGCCGACAACATCATCGTGATCATGACTCACGCCTCCAAGGACGGTGAGTCCAAACTGCTGTCCAAGTGCAG
Amino Acid Sequence
>succinyl-CoA:3-ketoacid-CoA transferase
MAGFDKRVSSYEEAMAGLEDGMTVIAGGFGLCGIPENLIAEIKRKGTRDLTIVSNNCGVDGFGLGVLLTDRQISKVIASYVGENKLFEEQLLKGDIEVIL TPQGTLAEKMRAGGAGIPAFFTATGVGTPVAEGKEVREFKGRKYLMEESITGDFAIVKGWKADHFGNVIYRHTAQNFNPLAATAGKITVVEVEEIVEPGE LDPSQIHTPGIYVDRVICGTFEKRIEQRTIRK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site