Pseudomonas sp. H1h, U862_RS0114135

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. H1h Contig16, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CATCAAGGCTGCCGGTGACTTCTTTCCGGTAACGGGCGATGAAGGGAACGGTAGAGCCTTCATCGAGTAGCGCGACGGCCGCTTCGACCTGTTGCGGGCG TACGCCGAGTTCCTCGGCGATGCGGCTGTTGATGCTGTCCATAAAACCACCTGACATATTGTGAAAGCAGGCTCGCAGGCACGGAAATAAAGGCCCGGAG TCTGGTTGAGCGGCTAGAAAATTGCCGCTGCCTGGGTCAAAAGGCACCCCATTGACCCGTGAAATCGAACAATTACTGCGCAGCTCCGGAAAAAATCGCG GCCACCTGCGGTAACGATTCAGACGTTGCCTGGCACAAAACGCCGCGCATTATAACCAGCGTTCTGTCATTCGGGGGTGTAGCAGTCTGTAGGCATAAAC CCCGGTTTTCTGGCAGTGAAGGAAAAATCTGCTAACAATGCACACGGTGCGTATAACGGCAGCTACGCCATAATGCGCGCCGAGCTAAAAGGAGCATCCA
DNA Sequence for Gene
>U862_RS0114135
ATGAGCAGCACTGCAAACAATGCTGAAGGCGAAAAAATTCTTATTGTTGACGACGATCCGGGGCTGAGCAGCCTGCTGGAACGTTTTTTCGTCAGCAAGG GCTACCGCGCCCGTGCCGTACCGAACACCGAGCAAATGGACCGTCTGCTGTCGCGTGAAGTGTTCAACCTGGTCGTCCTCGACCTGATGTTGCCGGGCGA AGACGGTCTGACCGCGTGCCGTCGCCTGCGGGCCGCAAACAACCAGATCCCGATCATCATGCTCACCGCCAAGGGCGATGAGATGAGCCGCATCAAGGGC CTGGAACTGGGCGCCGATGACTACCTGGCCAAGCCGTTCAACCCGGACGAGTTGATGGCCCGGGTCAAGGCTGTTCTGCGTCGCCAGGCCGCTCCGGTGC CGGGTGCGCCGGGCAGCGAAGACGAAAACGTCACCTTCGGTGACTACGTGCTGTCGCTGGCGACCCGCGAACTGAAGCGAGGCGACGAAGTGCACATGCT CACCACCGGTGAGTTTGCGGTACTCAAGGCCTTGGTGATGAATGCGCGTCAGCCGCTGACCCGCGACAAACTGATGAACCTGGCCCGTGGCCGCGAGTGG GATGCGTTGGAGCGTTCCATCGACGTGCAGATTTCCCGTCTGCGCCGGATGATCGAACCCGATCCGTCGAAACCGCGCTACATCCAGACTGTCTGGGGCG TGGGCTACGTGTTCGTACCGGATGGCGCCGCTACCAAGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCGGCGATTTGTAGGAGCGGGTCTGCGCAGGTCGGGTTGATCGACCCTCTACGCAGACTCGCAATCCGCAATATGCGAGCATGGCTCGCTCCTGCAAGTG TTTAACGGTTATCGATGAAAACCCCCGTCTGGTTCCCCCAAAGTTTTTTCTCCCGCACCCTTTGGCTGGTGCTAATCGTCGTGCTGTTTTCCAAGGCGCT GACCCTGGTTTATCTGTTGATGAACGAGGACGTGCTGGTGGATCGCCAATACAGCCACGGCGTCGCCCTGACGCTGCGCGCCTATTGGGCTGCCGATGAA GAAAACCGCGCGAAGATCGCCGATGCTGCAACCCTGATCCGGGTGGTCGGCGCCGGTGTGCCGGAAGGCGAGCAGCACTGGCCGTACAGTGAAATCTATC AGCGGCAGATGCAGGCGGAGCTGGGGGCCGATACTGAAGTGCGTTTGCGCATGCACTCGCCGCCGGCGCTGTGGGTGCGTGCGCCGAGCCTCGGTGATGG
Amino Acid Sequence
>chemotaxis protein CheY
MSSTANNAEGEKILIVDDDPGLSSLLERFFVSKGYRARAVPNTEQMDRLLSREVFNLVVLDLMLPGEDGLTACRRLRAANNQIPIIMLTAKGDEMSRIKG LELGADDYLAKPFNPDELMARVKAVLRRQAAPVPGAPGSEDENVTFGDYVLSLATRELKRGDEVHMLTTGEFAVLKALVMNARQPLTRDKLMNLARGREW DALERSIDVQISRLRRMIEPDPSKPRYIQTVWGVGYVFVPDGAATK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site