Pseudomonas sp. H1h, U862_RS0113410

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. H1h Contig15, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GTAGGAAAAGCGCGAAGTGCCGTCCGGCATCAAGCCTTTGCCCTGAGTCGCGCGAATGGCCTGACACAGGTTGGTCTTGCCCGACTTGCAGAATTTGCAC TGGCCGCATTCCGGGGTGTACAGCGGAATCACATGATCGCCGACGGCGACGGAGGTCACGCCCTCGCCAATGGCCTCGACGATCGCGCCGCCTTCATGGC CGAGGATCGACGCAAAGATGCCTTCCGGGTCAGCGCCGGACAGGGTGTAGGCGTCAGTGTGGCAAACCCCGGAAGCCACTACGCGCAGCAACACTTCACC GGCCTTGGGCATGGCGACATCGACTTCTACGATTTCCAGCGGCTTCTTGGCCTCGAAGGCAACGGCGGCGCGCGACTTGATCATGCTGACTCTCCAGTGA ATCCATTGAATAAAAAACCAGACCGCGAGTGTAGTACAGCGCGTTCTGATGAATAATCCGGACAAAAGCAAAACATTATTGCCATACAGGGATAATCCCG
DNA Sequence for Gene
>U862_RS0113410
ATGTCCGAAAACCGCTGGGAAGGTATCGACGAGTTCGTCGCCGTCGCCGAGTGCAGCCAATTCACCGCCGCAGCAGAACGCCTTGGGGTTTCTTCCTCGC ACATCAGTCGACAAATCGTACGGCTGGAAGAGCGCTTGCAGACGCGCCTGCTCTATCGCAGTACCCGTCGCGTCACCCTGACCGAAGCCGGACAGACCTT TCTGCAGCATTGCCAACGCCTGCAGGACGGTCGCGAAGAAGCCCTGCGCGCGGTCGGCGACCTGACCAGCGAACCCAAAGGCATGTTGCGCATGACCTGT GCCGTGGCGTACGGCGAGCGGTTTATCGTGCCGCTGGTGACGCGGTTCATGGGGCAATACCCGCAATTGCGCGTCGATATCGAACTGAGCAATCGCCAAC TCGATCTGGTGCATGAGGGGCTGGATCTGGCGATCCGCCTGGGTCGCCTGCAGGATTCGCGACTGGTCGCCACACGGCTGGCGCCACGACGCATGTACCT GTGCGCATCGCCGTCCTACCTGGAACGGTACGGTCGCCCACACAGTTTGTCGGAACTGAGCCGGCACAATTGCCTGATCGGCAGTTCGGACCTGTGGCAA CTGGAACAGAACGGGCGCGAATTTTCCCAGCGTGTACAGGGAAACTGGCGCTGTAACAGTGGGCAAGCGGTACTGGACGCGGCGCTGCAAGGGGTCGGGT TGTGCCAGTTGCCGGACTATTACGTGCTCGAGCATTTGCACAGTGGCGCGTTGATTTCGTTGCTGGAAGCGCATCAGCCGCCGAATACGGCGGTGTGGGC GCTGTATCCGCAGCAGCGGCACCTGTCGCCGAAGGTGCGCAAGCTGGTGGATTTTTTGAAGGGAGGGTTGGCCGAGCGGCCGGAATATCGGAGCTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACAGTCATCGGTGTGTCAGCAAAGTATTGGTTGGCTGAAACATCGCCTTCGCGAGCAGGCTCGCTCCCACAGTGGATCCTCAGTGGATGCAAATTTGTGT TCGGCGTCATTCAAAGGTGGGAGCGAGCCTGCTCGCGAAAGCGATCTGACAGGCGCCACTGCACTCAGCGGCGGTTAGCCCAACGCTGGCGCAGCCATTC GAGGTCTTCAGGCCGGGTGACCTTGAGGTTGTCCGCCCGACCTTCGATCAGGCGTGGCGCCAGGCCGGCCCACTCCATCGCCGAGGCTTCATCGGTGATC AGCGCATCAGCCACCAGGCTATCCGCCAACGCCCGATGCAGCGCGCCGAGACGGAACATCTGTGGCGTGTAGGCCTGCCAGATCACGCTGCGATCGACGG TTTCGACCACACGACCGTGCTTGTCGATGCGTTTAAGCGTGTCGCGTGCCGGCACTGCCAGCAGGCCACCCACCGGGTCATGCGCCAGCTCAGCCAGCAG
Amino Acid Sequence
>LysR family transcriptional regulator
MSENRWEGIDEFVAVAECSQFTAAAERLGVSSSHISRQIVRLEERLQTRLLYRSTRRVTLTEAGQTFLQHCQRLQDGREEALRAVGDLTSEPKGMLRMTC AVAYGERFIVPLVTRFMGQYPQLRVDIELSNRQLDLVHEGLDLAIRLGRLQDSRLVATRLAPRRMYLCASPSYLERYGRPHSLSELSRHNCLIGSSDLWQ LEQNGREFSQRVQGNWRCNSGQAVLDAALQGVGLCQLPDYYVLEHLHSGALISLLEAHQPPNTAVWALYPQQRHLSPKVRKLVDFLKGGLAERPEYRS
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site