Pseudomonas sp. H1h, U862_RS0112735

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. H1h Contig15, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GTGTCTGAATTGCGGTGCCTGTTGTTCCCATTTTCGTGTGTCTTTTTTCTGGGGTGAATGCGCTTCCTCCGGCGGTACGGTGCCCGATGAACTGGTCACC CAGATCAGCCCCAGCCGGGTGGCTATGAACGGCACCGACTGCAAATCACCACGGTGTACTGCGCTGGTCGGTGAGGTCGGCAGCCAGGTGCAGTGCTCGA TTTACGAACAGCGCTCCAGCCCCTGCCGTGAATTCGAATCGTCCTGGGAAAACGGCGAACAGAATGTCGACTGCGACAAGGCCCGTGCACGCTTCGGCCT GCCGCCTCTGCAACCGGACTGGGCCGAGATCCCTTTTGAACAAAGCGCCTGACGCTTAGCGCAAAACGCTATGACGCTAATGTCGAAATCATTAGCGCCA ATGTGCCACTACGCCTTGCACCCCACAAACGGCCTCTATACTGCTGTCATTCGCCTGCGTTAATCGCGCAGTCAGGACGACTTCAGAGACGGGGCATGCT
DNA Sequence for Gene
>U862_RS0112735
ATGGAGTGGCTTGGTTTGCAGTTTGTTACCGAGCTGCCGGAGAGCGGGCAGGTCATTCTCGATTGCACACATAACCCCTTGCTGGTGCTGGTGGCCTATC TGGTCGCCTGCGCCGCGAGTTTTGCCACGCTCGACATGGCCGAACGGGTCGGCCACGCCGAAGACCCGGGCTCACAACGGGTGTGGCGCTGGATCGGCGC CACCTGCCTGGCCGGCGGCATCTGGGCCATGCACTTTATCGCCATGCTGGCGTTCCAGGCGCCGATCGAAATTCACTACGACCTGGCGATCACCCTGTTT TCCCTGCTGATCGCCCTGCTCGCCTCATGGCTGGCGATGCACACCTTGAGCACCCCGCAACCCAGCCTGGTGCACTACCTGAAAACCGCCATCGTCATCG GCCTGGGCATCGCCGGCATGCATTACGTTGGCATGGCGGCGATGCACTCGGTGGCTATCGCGTATTACCAGCCCGTGCTGTTCTGCCTGTCGATCCTGAT TGCCATTGGCGCCAGCTACGCCGCGCTGTGGGTCGCCGGTTATTTGCGTGAAGGTAGCGGCCGGTTTCATCAATTGCTCAAATACACCGCCGCGGTGATC CTCGGCGCCGGCATCATCAGCATGCATTTCACCGCAATGGCCGCGCTGCACCTGGTGTTGCCCGAAGGCACAGCGCCGACGCTGAGTGCCGAAACCAACC ACCTGCAACTGGGCCTGACGGTCGCGCTGATCATCCTGCTGATTCTGGGCAGCGCGATCAGTGCGGCGCTGGCCGACAAGAAGCTGCAGAGCAAGGAACA CGACCTTCGCCGGGTCAATGCCCTGCTCGGCCAGCTCGATCAGGCGCGGATGTCGCTACAGCAAGTGGCCAACTACGACGCCCTGACCAACCTGATCAAT CGCCGAGGCTTCAATCAGATCTTCGCCGAGAAGCTCAGCCAGAAAACCAGCGAAGGCGGCATGCTCGCGGTGATGTTTCTCGACATCGACCACTTCAAGC GGATCAACGACAGCCTCGGGCATGACGCCGGTGACGCCTTGCTCAAAGTCATCGCCCATCACATCAAGAGTTCGGTGCGCAGCCATGACGACGTGGTTGC ACGTTTTGGCGGCGACGAGTTCTGCATCCTGATTGGCCTGCACGACCGCGAAGAAGCGCGCACCATGGCGCAACGGATCATGCAGAAAATGAAGGAGCCG ATCGAGCTGGCCGGACGGCGTATGGTGATGACCACGAGCATCGGCATCAGCCTGTTCCCCGACGATGGCACCACCTGCGAAGAACTGCTCAAGCATGCGG ATCTGGCGCTGTATCAGTCCAAGGGCGCCGGGCGTAACGGTCTGCATTTTTTCAGTTCGAACATGAAGACCCGCGCCAGCCTTGAACTGCAACTGGAAGA AGAGCTGCGCCAGGCCCTGCGTGAAGAGCACGGGCTGACGCTGTATTACCAACCGATCTTCGAACTGAAAACCGGCCGGGTGACCAAACTCGAAGCATTG ATCCGCTGGCAGCACCCGGTGCATGGCCTGCTGGCTCCGGACCGTTTTATTGCGATTGCCGAAACCAACGGCCTGATCGCCGAACTGGACAACTGGGTGC TGCGCAGGGCCTGCACCGACCTTGGCGAACTGACGCGCCATGGCTGCGACGAACTGAAAATCGCCTGGAACTGCTCGCCACTCAACCTCGCCCGGGAAGA GCTGGCCGACGAAATCGAAAGTGCGCTGCGCAGCGCCGGAGTCGCACCCGAGCGGCTGGAACTGGAGGTCACGGAAAACGCGCTGATGGGCAACATCGCC AACACCCTGGTGCTGTTGCGGCAGATTCGCGCGCTTGGCGTGTCGTTGTCGATTGACGATTTCGGCACCGGCTATTCATCGCTGGCCTACCTCAAGCGCC TGCCGCTCAACACGCTGAAGATCGACCGCTCGTTCATCCTCGACATCCCCACGGCAACCGCCGACATGGAGATCGTCCAGGCAATCATCGTCATGGCCCA CACCCTGCATTTACAGGTGGTGACCGAAGGCGTGGAAAGCCTGGAGCAATACGAGTTTCTTGAACGCTCGGGTTGCGACTTCATTCAGGGCTATCTGCTC AGCCGCCCGGTGCCGCTGGACGAATTACGCCCGGTGCTGGAAGAAATCAATCAACGCAAGCACTCCCACGCGGTCAATCCGCTGAGTCTGGCGCGCGGTA CATTTGAACCAGTGTCGCTGGATCCTTGTGCAAAAAGCCCTGCGCCCCATGCAGGCGCATCAGTTGTGCGGCCAATCCGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCGGCGTGGCCGAACCCTGTTCGCGCGAAAATTTAACCGCCGTATCGAGATCCTTGAGCAGCGTGCGCACGTGCCATTTCACCGGTTCGAAACGGCTCTC GGCCATTTGCGGGGCAAGGATCTGCAACGGTTTCGAATCGGCAAAGCCACCGGCAAGCGCTTCGGCGATCAGGCTGGCATCGACCCCGGCCTGCTCGGCC AGCGCCACCACTTCGGCGATCACCAGCGCATTGCAGGCGACGATCATCTGATTGCAGGCCTTGGTCACTTGTCCCGCGCCAACGCCACCCATGTGCGTGA CGCGCTGGCCGAGGTTGAGCAGCACGGGGCGTACTCGCTGCAGATCCTGCGCCGTACCACCGACCATGACTGCCAGGCTGCCCGCCTCGGCGCCGACCAC ACCGCCGGACACCGGTGAATCGAGCCAGGCCATGCCGGTCCGGTCTGCCAACTCGGCCGCCATCTCACGCGTGGCGGTTGGTTCGAGGCTGGAAAAGTCC
Amino Acid Sequence
>diguanylate phosphodiesterase
MEWLGLQFVTELPESGQVILDCTHNPLLVLVAYLVACAASFATLDMAERVGHAEDPGSQRVWRWIGATCLAGGIWAMHFIAMLAFQAPIEIHYDLAITLF SLLIALLASWLAMHTLSTPQPSLVHYLKTAIVIGLGIAGMHYVGMAAMHSVAIAYYQPVLFCLSILIAIGASYAALWVAGYLREGSGRFHQLLKYTAAVI LGAGIISMHFTAMAALHLVLPEGTAPTLSAETNHLQLGLTVALIILLILGSAISAALADKKLQSKEHDLRRVNALLGQLDQARMSLQQVANYDALTNLIN RRGFNQIFAEKLSQKTSEGGMLAVMFLDIDHFKRINDSLGHDAGDALLKVIAHHIKSSVRSHDDVVARFGGDEFCILIGLHDREEARTMAQRIMQKMKEP IELAGRRMVMTTSIGISLFPDDGTTCEELLKHADLALYQSKGAGRNGLHFFSSNMKTRASLELQLEEELRQALREEHGLTLYYQPIFELKTGRVTKLEAL IRWQHPVHGLLAPDRFIAIAETNGLIAELDNWVLRRACTDLGELTRHGCDELKIAWNCSPLNLAREELADEIESALRSAGVAPERLELEVTENALMGNIA NTLVLLRQIRALGVSLSIDDFGTGYSSLAYLKRLPLNTLKIDRSFILDIPTATADMEIVQAIIVMAHTLHLQVVTEGVESLEQYEFLERSGCDFIQGYLL SRPVPLDELRPVLEEINQRKHSHAVNPLSLARGTFEPVSLDPCAKSPAPHAGASVVRPIR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site