Pseudomonas sp. H1h, U862_RS0112650

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. H1h Contig15, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CATGACCGGCGCACTGTTCCTGTATATGTGCATGCAGCCGCTGTTCGGCATGCTCGCCGACAAGATCGGTCGACGTAATTCGATGCTCTGGTTCGGTGCG CTCGGCACGCTGTTCACCGTGCCGATCCTGTTGAGCCTGAAGAGCATCAGCAGCCCGGTTCTGGCCTTCGTGCTGATCACCGTGGCGCTGGCGATCGTCA GTTTCTACACCTCGATCAGCGGCCTGGTGAAAGCCGAAATGTTCCCGCCGGAAGTCCGCGCGCTCGGCGTGGGTCTGGCCTACGCGGTGGCCAACGCGAT CTTCGGCGGTTCGGCCGAATACGTGGCCCTGAGCCTGAAAGCCGGGGGCATGGAAAACGCCTTCTACTGGTACGTTACGGTGATGATGGCAGTAGCGTTC CTGTTCAGCCTGCGCCTGCCGAAACAGGCGGCGTACTTGCACCACGATCTCTAAACCGATGCGCGCGGGCCGTGAAGGCCCGCGCCGGCAAGGACTGTTT
DNA Sequence for Gene
>U862_RS0112650
ATGACTCAGCGACCGGGCAATCAATTGTTCGATGCCTACTTTACTGCCCGCGATATGCGCGAAGTGTTCTGCGATCAGGGCCGGGTGCAGGCGATGCTCG ACTTCGAAGCGGCGCTGGCCCGGGCCGAGGCGCGGGTCGGGGTAATTCCTTCCTCTGCCGTTGCCCCGATTGCCGCTGCATGCAACGCCGGTCTGTATGA CTTCGCCGCGCTCGGTGACGCCATCGCCACGGCGGGCAATTCGGCGATTCCCTTGGTCAAGGCCTTGGGCAAGCAGATCGCTGCGACCGACGTCGAGGCC GAGCGTTATGTGCATCTGGGCGCCACCAGTCAGGACGTGATGGATTCCGGGCTGGTGCTGCAAATGCGTCAGGCGCTGGAACTGATCGACGCGGATCTGG CGCAACTGGCCAACGCGCTCGCTGCGCAGGCGCAGCGGCATGCGGCGACGCCACTGGCCGGGCGCACCTGGCTGCAACACGCGACACCGGTGACTCTGGG CATGAAAATCGCCGGTTGGCTTGGCGCGATGACCCGCAGCCGTCAGCGTCTGCGCGAGCTCAAGCCTCGTCTGTTGGTGCTGCAGTTTGGCGGTGCGTCC GGCACGCTCGCGGCGCTCGGCGGTCAGGCGTTGCCCATCGCCCAGGCCTTGGCCGAAGAACTGCAACTGACACTGCCCGAGCAACCGTGGCACACCCAGC GTGATCGCATCGTCGAGTTCGGCGCGGTACTCGGTTTGATCGCCGGCAGCCTCGGCAAACTCGGTCGCGACGTCAGCCTGTTGATGCAGACCGAGGCGGC GGAAGTATTCGAACCGTCGGCACCGGGCAAGGGCGGTTCGTCGACCATGCCGCACAAGCGCAATCCGGTCGGCGCGGCGGTATTGATCGGCGCGGCGACG CGGGTGCCGGGGCTGGTCTCGACGTTGTTCAGCGCCATGCCTCAGGAGCACGAACGCAGTCTCGGTCTGTGGCATGCCGAATGGGAAACCCTGCCGGAAA TCTGTTGCCTGGTGTCCGGTGCGCTGCAACAGGCGCGCCTGCTGGCCGATGGTCTGGAGGTCGATGCCGAGCGCATGGCGCGCAACCTCGAATTGACCCA AGGGCTGGTGCTGGCCGAAGCGGTGAGCATCGTCCTCGCGCAACGGGTCGGGCGCGACACTGCGCATCATTTGCTCGAGCAGTGCTGCAAACGCGCGGTG GCCGAGCAGCGCCATCTGCGCGCGGTACTCGGCGACGAGCCGCAAGTGACTGCCGAACTGAGCAGTGCTGAACTGGATCATCTGCTTGACCCTGCGCATT ACCTCGGCCAGGCCCAAGTCTGGGTCGCGCGCGCAGTGGCCGAACACAATGCTTTGACTGTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AGGAGAGGGCTGTGGCTTTCGTTCAACTCGCCGATGGCGAACTGCACTATCAGATTCAAGGGCCTCAACTTCAAGGCCCGACCGATGCGCCGGTGCTGGT GCTGTCCAACTCGCTGGGCACCGACCTGCACATGTGGGACGCGCAGATGCCGGCGTTCACCGAGCACTTCCGCGTGCTGCGTTTCGACACCCGTGGTCAC GGTCAATCGCTGGTGACGCCAGGGCCGTACAGCATCGAGCAACTGGGCCGTGACGTGCTGGGGCTGCTGGATGCGCTGCACATCGAGCGTGCGCATTTTT GCGGATTGTCGATGGGTGGCTTGATCGGCCAATGGCTGGGGATCCATGCCGGTCATCGTCTGCACAAACTGATCGTGTGCAACACCGCTGCGAAAATCGG CGATCCGTCGGTATGGAACCCGCGCATCGAAACCGTGCTGCGTGATGGCCCGGCAGCGATGGTTGCCCTGCGTGATGCGTCGATTGCGCGCTGGTTCACT
Amino Acid Sequence
>3-carboxy-cis,cis-muconate cycloisomerase
MTQRPGNQLFDAYFTARDMREVFCDQGRVQAMLDFEAALARAEARVGVIPSSAVAPIAAACNAGLYDFAALGDAIATAGNSAIPLVKALGKQIAATDVEA ERYVHLGATSQDVMDSGLVLQMRQALELIDADLAQLANALAAQAQRHAATPLAGRTWLQHATPVTLGMKIAGWLGAMTRSRQRLRELKPRLLVLQFGGAS GTLAALGGQALPIAQALAEELQLTLPEQPWHTQRDRIVEFGAVLGLIAGSLGKLGRDVSLLMQTEAAEVFEPSAPGKGGSSTMPHKRNPVGAAVLIGAAT RVPGLVSTLFSAMPQEHERSLGLWHAEWETLPEICCLVSGALQQARLLADGLEVDAERMARNLELTQGLVLAEAVSIVLAQRVGRDTAHHLLEQCCKRAV AEQRHLRAVLGDEPQVTAELSSAELDHLLDPAHYLGQAQVWVARAVAEHNALTV
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site