Pseudomonas sp. H1h, U862_RS0112620

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. H1h Contig15, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AGGCGGGTGACAACTCGGCAGCGGTCAAGCTGACCCTGGAAGACGGCAGCCAGTACAAGCTCGACGGTAAGCTGGAGTTCTCCGAAGTGTCGGTTGATCC GACTACCGGTTCCGTGACCCTGCGCGCCGTGTTCCCGAACCCGGATCACACCCTGCTGCCAGGCATGTTCGTGCGCGCCCAGTTGCAGGCCGGGGTCAAC GCCGCCGCCATTCTGGCGCCGCAACAAGGCGTGACCCGTGACCTCAAGGGCACCCCGACCGCACTGGTCGTCGGCGCCGACAACAAGGTCGAACTGCGTC AGCTCAAGGCCAGCCGCACTGTCGGCAGCCAGTGGCTGATCGAAGACGGCCTGAAAGCCGGCGATCGTCTGATCACGGAAGGCCTGCAATTCGTTCGCCC AGGTGTTCAGGTCAACCCGACTGAAGCGACTAACGTAGCCAAGAACCCGGCACCCGCCAAGGCAGATGACAAAGCCTACGGCGGCAAAGGGGAGTAACTC
DNA Sequence for Gene
>U862_RS0112620
ATGTCGAAATTTTTTATCGACCGTCCGATTTTCGCCTGGGTAATTGCCCTGGTGATCATGTTGGTCGGGGCTCTATCGATCCTGAAATTGCCGATCAACC AGTACCCGAGCATTGCGCCTCCGGCCATCGCGATCTCCGTGACCTACCCGGGTGCTTCGGCACAAACGGTTCAGGACACCGTGGTTCAGGTGATCGAGCA GCAGCTCAACGGTATCGACAACCTGCGTTATGTGTCCTCGGAAAGTAACTCCGACGGCAGCATGACCATCACTGCGACCTTCGAGCAAGGCACCAACTCC GACACCGCGCAGGTCCAGGTTCAGAACAAGCTGAACCTGGCCACCCCGTTGCTGCCGCAGGAAGTGCAGCAACAGGGTATCCGCGTGACCAAGGCAGTGA AGAACTTCCTGCTGGTGATCGGCGTGGTGTCGCGTGACGGCAGCATGACCAAGGACGACCTGTCCAACTACATCGTGTCGAACATGCAGGACCCGATCTC GCGGACCGCCGGTGTCGGTGACTTCCAGGTCTTCGGTGCCCAGTACGCGATGCGCATCTGGCTCGACCCGGCCAAGTTGAACAAGTACAACCTGACCCCG GCTGACGTCAGCACTGCCATTTCGGCGCAGAACGTCCAGGTGTCCTCCGGTCAGCTCGGCGGTTTGCCGGCGCTGCCTGGCCAGCAATTGAACGCCACGA TCATCGGCAAGACCCGTCTGCAGACTGCCGAGCAGTTCAAGGCGATTCTGCTGAAGGTCAACCAGGACGGCTCGCAAGTGCACATCGGCGACGTCGCCGA CGTCGGTCTGGGTGGCGAAAACTCGACCATCTCGGCGCAGTTCAACGGCAAGCCGTCGTCCGGTCTGGCGGTCAAGCTGGCCAACGGCGCCAACGCCCTG GACACCGCCAAGGCCCTGCGTAAAACCATCGACGAGCTCAGCCCGTTCTTCCCGCAAGGCATGGAAGTGGTATTCCCGTACGACACCACCCCGGTGGTGA CCGAGTCGATCAAAGGTGTGGTTGAAACCCTGGTCGAAGCAATCGTGCTGGTGTTCCTGGTGATGTTCCTGTTCCTGCAGAACTTCCGCGCCACCGTCAT CACCACTATGACCGTGCCGGTGGTATTGCTCGGTACGTTCGGGATCCTCGCGGCCTTTGGTTTCAGCATCAACACCCTGACCATGTTCGGCATGGTGCTG GCCATCGGCTTGCTGGTGGACGACGCCATCGTCGTGGTGGAAAACGTCGAGCGGGTGATGAGCGAGGAAGGCTTGTCACCGAAAGAGGCGACCAAGAAGT CCATGGGCCAGATTCAGGGCGCCCTGGTCGGTATTGCCCTGGTACTGTCGGCGGTACTGTTGCCGATGGCGTTCTTCAGCGGTTCCACCGGTGTGATCTA CAAGCAGTTCTCGATCACCATTGTCTCGGCCATGGCCCTGTCGGTCATGGTTGCGCTGATTTTCACCCCGGCGCTGTGCGCCACCATGCTCAAGGCGATT CCGAAAGGCGAGCACGGCACGCCGAAAAAAGGTTTCTTCGGCTGGTTCAACCGCACCTTCGACAGCGGCGTCAGAAGCTACGAGCGCGGTGTCGGCAACA TGCTGTCACGCAAGGCGCCGTACCTGCTGGCCTACCTGTTGATCGTGGTTGGCATGATCTGGCTGTTCACCCGCATTCCGACCGCATTCCTGCCCGAAGA AGACCAGGGCGTACTGTTCGCCCAGGTGCAGACTCCGGCCGGCTCCAGTGCCGAGCGGACACAGGTGGTGATCGACGAAATGCGTTCCTACCTGCTGGAG AAAGAGTCCGGCGCGGTGGCTTCGGTGTTCACCGTGAACGGCTTCAACTTCGCCGGTCGTGGTCAGAGCTCGGGTCTGGCGTTCATCATGCTCAAGCCGT GGCACGAGCGTGATTCGAGCAACAGCGTGTTTGCCCTGGCTCAGCGTGCGCAGCAACACTTCTTCAGCTTCCGCGATGCGATGGTGTTTGCCTTCGCCCC GCCGGCAGTACTGGAGTTGGGTAACGCCACCGGTTTCGACGTGTTCCTGCAAGACCGCGCCGGTATCGGTCACGAAAAACTGATGGAAGCGCGTAATCAG TTCCTCGGCATGGCCGCGCAGAGCAAGGTGCTCTACCAGGTGCGTCCGAACGGTCTGAACGACGAGCCGCAATACCATCTGGAAATCGACGATGCGAAAG CCCGCGCCCTCGGCGTGAGCATTTCCGACATCAACAGCACCCTGTCGATTTCCTTCGGTAGTAGCTACGTCAACGACTTCATCGACCGTGGTCGGGTGAA GAAGGTGTACGTGCAAGGTCAGGCCGGTGCTCGCATGAGCCCTGAAGACTTGAAGAAGTGGTATGTGCGCAACAGCACCGGGACCATGGTGCCGTTCTCC GCATTCGCCAAGGGTGAGTGGATTTACGGATCGCCGAAACTGGCGCGTTACAACGGTGTAGAAGCGATGGAGATCCTCGGTTCTCCGGCGCCGGGTTATT CCACCGGTGAAGCGATGGCCGAAGTCGAAGCGATTGCCAAGAAGCTGCCGGCCGGTGTCGGTATCTCCTGGACGGGTCTGTCCTACGAGGAACGTCTGTC CGGCTCGCAAGCGCCAGCGCTGTACGCCCTGTCGCTGCTGATGGTGTTCCTGTGTCTGGCGGCGCTGTACGAAAGCTGGTCGATTCCTATCGCCGTTATG CTCGTGGTACCGCTGGGGATCATCGGTGCGCTGATGGCCACCAGCCTGCGCGGTCTGTCCAACGACGTGTACTTCCAGGTGGGTCTGTTGACGACCATCG GTCTGGCGGCTAAAAACGCCATTCTGATCGTCGAATTTGCCAAGGAGCTGCACGAGCAAGGGCGAAGTCTGCGCGATGCCGCGATCGAAGCGTGCCGCAT GCGTCTGCGACCGATCATCATGACCTCGCTGGCGTTCGTCCTCGGTGTAGTACCGTTGGCAATCTCCACCGGCGCCGGTTCAGGCAGCCAGCACGCAATC GGTACCGGCGTGATTGGCGGTATGCTCACGGCCACGATCCTGGCGATCTTCTGGGTCCCACTGTTCTTCGTTACGGTTTCGTCCATGGGCCAGCGTAAAA TCGCCGATCCGGATGAAACAACTGAAACTCCTAAAGAGGCTGGCCAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCAAGTCGCTACTCTCCATCGCAGTCGCCGCCTTCGTGCTGAGCGGTTGCTCGCTGATACCCGATTATCAGCAGCCTGAGGCTCCGGTCGCAGGTCAGTA CCCGCAAGGGTCGGCGTACTCGCCGGCCCAGGCACCGGCGCAGGCCGCTGCCGAGCAGGGCTGGAAGCAGTTTTTCCATGACCCGGCCCTGCAACAGCTG ATTCAGGTCTCGCTTGAAAACAACCGCGACCTGCGGGTCGCAGCGCTGAACATCGACGCTTACGCGGCTCAATACCGCATCCAGCGGGCTGATCTGTTCC CGGCGGTTTCGGCCAACGCCAGCGGCAGCCGTCAGCGACTGCCGGCCAGGGCTTCGAGTACCGGCCAGGAGATGATCACCAGCCAGTATTCGGCGACCGT CGGCATCAGCGCCTATGAGCTCGACCTGTTCGGTCGGGTTCGCAGCCTGAGCGAACAAGCGTTGCAACAATACTTCGCCACCGAAGAAGCGCGCCGCAGC
Amino Acid Sequence
>multidrug transporter
MSKFFIDRPIFAWVIALVIMLVGALSILKLPINQYPSIAPPAIAISVTYPGASAQTVQDTVVQVIEQQLNGIDNLRYVSSESNSDGSMTITATFEQGTNS DTAQVQVQNKLNLATPLLPQEVQQQGIRVTKAVKNFLLVIGVVSRDGSMTKDDLSNYIVSNMQDPISRTAGVGDFQVFGAQYAMRIWLDPAKLNKYNLTP ADVSTAISAQNVQVSSGQLGGLPALPGQQLNATIIGKTRLQTAEQFKAILLKVNQDGSQVHIGDVADVGLGGENSTISAQFNGKPSSGLAVKLANGANAL DTAKALRKTIDELSPFFPQGMEVVFPYDTTPVVTESIKGVVETLVEAIVLVFLVMFLFLQNFRATVITTMTVPVVLLGTFGILAAFGFSINTLTMFGMVL AIGLLVDDAIVVVENVERVMSEEGLSPKEATKKSMGQIQGALVGIALVLSAVLLPMAFFSGSTGVIYKQFSITIVSAMALSVMVALIFTPALCATMLKAI PKGEHGTPKKGFFGWFNRTFDSGVRSYERGVGNMLSRKAPYLLAYLLIVVGMIWLFTRIPTAFLPEEDQGVLFAQVQTPAGSSAERTQVVIDEMRSYLLE KESGAVASVFTVNGFNFAGRGQSSGLAFIMLKPWHERDSSNSVFALAQRAQQHFFSFRDAMVFAFAPPAVLELGNATGFDVFLQDRAGIGHEKLMEARNQ FLGMAAQSKVLYQVRPNGLNDEPQYHLEIDDAKARALGVSISDINSTLSISFGSSYVNDFIDRGRVKKVYVQGQAGARMSPEDLKKWYVRNSTGTMVPFS AFAKGEWIYGSPKLARYNGVEAMEILGSPAPGYSTGEAMAEVEAIAKKLPAGVGISWTGLSYEERLSGSQAPALYALSLLMVFLCLAALYESWSIPIAVM LVVPLGIIGALMATSLRGLSNDVYFQVGLLTTIGLAAKNAILIVEFAKELHEQGRSLRDAAIEACRMRLRPIIMTSLAFVLGVVPLAISTGAGSGSQHAI GTGVIGGMLTATILAIFWVPLFFVTVSSMGQRKIADPDETTETPKEAGQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site