Pseudomonas sp. H1h, U862_RS0111805
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. H1h Contig15, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCACAACACCAGACCGAGCGCCGCTTCGAGCTGGCTCATGTAGGTGCTGATCGCCGAGGTCGACAGGTTGAGTTCCTGCTGCGCATTGGCGAAGCCCTG ATGCCGCACGACGCTGACGAAGATGCGCAATAGTTTCAGGTCAGGTAAAGCGTTGGCCATGTCTACTCCATCACAAGAAACACACGGTGCGTCTGGAAAC ACACCCTCCCTGTGGGAGCGGGCTTGCTCGCGAAGGCGTCGTGTCAGTTGACATCCATGATGCTGACACACCGTATTCGCGAGCAAGCCCGCTCCCACAG GGGCATCCTGTTCACCCCGGTGAACAGCACTGAGTCTATCTCCAGCCTCGGCATTAGTTTAGAAAAATCTGAACTAAGTATTTGCCCGTAGCGATTCTTC CCCCCCACTACATTTCGCAGAATCGACCCCACAGCGGCGTCCGAACCTGTGTTGAACGGTGCGCCGACATAAATAAAACAAAGACGATGAGGCCCTACCC
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| DNA Sequence for Gene |
>U862_RS0111805
GTGGACAAGATTCTTCACCAACCACTGGGCGGCAACGAAATGCCGCGCTTCGGCGGCATCGCCACCATGCTCCGACTCCCCCATGTACCGACCGCTGCCG GCCTGGACGCTGCCTTCGTTGGCGTGCCTCTGGACATCGGTACTTCGCTGCGCCCAGGCACCCGCTTCGGGCCACGCGACATCCGCACCGAATCGGTGAT GATCCGCCCGTACAACATGGCCACCGGCGCCGCCCCGTTCGACTCGCTGTCGGTCGCCGACATCGGTGACGTGGCGATCAACACCTTCAACCTGCTCGAC GCCGTGCGCATCATCGAAGAAGCCTACGACAACATCCTTGAGCACAACGTGATCCCGATGACCTTGGGGGGTGATCACACCATCACCCTGCCGATCCTGC GGGCGATTCATAAAAAGCACGGCAAGGTCGGTCTGGTGCACATCGATGCACACGCTGACGTCAACGATCACATGTTCGGCGAGAAGATCGCTCACGGTAC GACCTTCCGTCGCGCCGTCGAAGAAGGTCTGCTGGACTGCGACCGCGTGGTGCAGATTGGTCTGCGCGCGCAGGGCTATACCGCTGACGACTTCAACTGG AGCCGCGATCAGGGCTTCCGCGTCGTGCAAGCCGAAGAGTGCTGGCACAAGTCGCTGGCACCGCTAATGGCCGAAGTGCGCGAAAAAGTCGGCGGCGGCC CGGTGTACCTGAGCTTTGACATCGACGGCATCGACCCGGCCTGGGCGCCGGGCACCGGCACCCCGGAAATCGGAGGTCTGACGACCATTCAGGCGATTGA AATCGTCCGTGGCTGCCAGGGCCTCGACCTGATCGGCTGCGATCTGGTAGAAGTCTCGCCCGCTTATGACACCACCGGCAACACCTCGCTGCTGGCCGCC AACCTGCTGTACGAAATGCTCTGCGTACTGCCTGGCGTGGTCCACCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGGTTCGGTCATGAACGAACGTGATCAGGTTCTGAAGGCGGCCGCCGGTCTGGTGTCGGCTTTCGCACGCAACGATCGCGAGGCTTACTTCGGCGCGTTC AGCGCCGATGCGAGCTTCGTGTTCTACACCCTCGAACAGCCCCTGCTGTCGCGCGATGCCTATCAGGCGTTGTGGGACAGCTGGCGCGCCGAGGATGGCT TCGAGGTGCTTTCCTGCACCTCAAGCAACGCCTTCGTCAGCCTGCAGGGTGACGTGGCGGTGTTTATCCATGACGTGGCCACCGAGCTGCGCATGCAAGG GGAGCAACACTTCAGCCAGGAGCGCGAGACGATTGTTTTCAAGAAACAAGCGTCGAGCCTAGAACAACAAGGCCATTGGCTGGCCTGCCATGAACATTTG TCCGCAATGCCGGAAGGGCTGCCATCCCCTAGGGTCTGCTGACGTTGGGTGACGACCGCGACGGAGACCCATTTGGCGCAGGGCAAGGCGCGAGGAACGC
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| Amino Acid Sequence |
>agmatinase
MDKILHQPLGGNEMPRFGGIATMLRLPHVPTAAGLDAAFVGVPLDIGTSLRPGTRFGPRDIRTESVMIRPYNMATGAAPFDSLSVADIGDVAINTFNLLD AVRIIEEAYDNILEHNVIPMTLGGDHTITLPILRAIHKKHGKVGLVHIDAHADVNDHMFGEKIAHGTTFRRAVEEGLLDCDRVVQIGLRAQGYTADDFNW SRDQGFRVVQAEECWHKSLAPLMAEVREKVGGGPVYLSFDIDGIDPAWAPGTGTPEIGGLTTIQAIEIVRGCQGLDLIGCDLVEVSPAYDTTGNTSLLAA NLLYEMLCVLPGVVHR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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