Pseudomonas sp. H1h, U862_RS0107995

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. H1h Contig11, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTCAATCGCCGATGTGCTGGTTCGACGGCTACGAAGGCGTGCCGACCAAAGCCTTCGTCGGCAACTATTACTTGAGCGGCGACACCGTGGAATGGAACCC GGACGGCAGCATCAGCTTTGTCGGGCGCAGCGATGACGTGATCACCACCTCGGGCTACCGCGTGGGGCCGTTCGACGTTGAAAGCGCACTGATCGAGCAC CCGGCGGTGGTCGAGGCGGCAGTGGTCGGCAAGCCGGACCCGGAGCGCACCGAGCTGGTCAAAGCCTTTGTCGTGCTCAACCCGCAATACCGCGCGGAAC CCGCGCTGGCCGAAGAGTTGCGGCAACACGTGCGCAAGCGTCTGGCCGCGCATTCGTATCCGCGTGAAATCGAATTTGTCAGCGAATTGCCGAAAACCCC AAGCGGCAAATTGCAGCGCTTTATCTTGCGCAACCAGGAAATCGCCAAGGCTCAAGAGGCCGCGGCGCACAACGTTTCAGCTTGAATCAGGAAGTCAGTC
DNA Sequence for Gene
>U862_RS0107995
ATGCAGATCGAAAACAAGGTTTTTATCGTCACTGGCGGCGCGTCCGGCCTGGGCGCGGCCACCGCTGAATTGCTGGTCAACGCCGGCGCCAAAGTAATGC TGGTGGACATGAACGCCGAAGCGCTTGCCGCGCAGGCCCAACGCCTCGGCGCGCAAAGTGTTGTCGCCGATATCAGCAACGAAGCCGCCGCCGAGGCCGC CGTGCAGGCGACCGTCAAAGCCTTTGGCAGCCTCAACGGCCTGGTCAACTGCGCCGGCATCGTCCGGGGCGAGAAGATCCTCGGCAAGAACGGCCCGCAC GCGCTGTCCAGTTTTGCCCAGGTGATCAACGTCAACCTGATCGGCAGCTTCAACATGCTGCGCCTGGCGGCAGCGGCCATCGCCGAGAGCGAAGCCAACG CCGACGGCGAGCGCGGGGTGATCATCAACACTGCGTCGGTGGCGGCGTTCGACGGCCAGATCGGCCAGGCGGCGTACTCGGCCTCCAAAGGCGCGATCGC CAGCCTGACCCTGCCGGCCGCCCGTGAACTGGCGCGCTTCGGCATCCGCGTAATGACCATCGCCCCGGGCATTTTCGAAACCCCGATGATGGCCGGCATG ACCCCGGAAGTCCGTGAGTCGCTGGCCGCAGGCGTACCGTTCCCGCCGCGTCTGGGCAAACCGGCCGAGTACGCCGCACTGGTTCGGCATATCATCGAAA ACAGCATGCTCAATGGTGAGGTGATCCGTCTCGACGGCGCCTTGCGCATGGCCGCCAAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGAGAATTTGTCATGACTCTTTCCAACGATCCGATTGTTATCGTCAGCGCCGTCCGCACCCCGATGGGCGGTTTTCAGGGCGAACTGAAAAGCCTCACCG CCCCGCAACTGGGCGCCGCCGCGATCAAGGCTGCAGTTGAACGCGCAGGCGTTGCCAGCGATGCGGTCGACGAAGTGCTGTTCGGTTGTGTATTGCCGGC CGGTCTCGGCCAGGCGCCTGCACGCCAAGCTGCACTGGGTGCCGGGCTGGACAAATCCACCCGTTGCACCACGGTCAACAAGATGTGCGGCTCGGGCATG GAAACCACCATTCTCGCTCACGACATGCTGATCGCAGGCAGTGCCGATGTGGTGATCGCTGGCGGTATGGAAAGCATGTCCAACTCGCCGTACCTGCTGG ACCGTGCCCGCGCCGGTTACCGCATGGGCCATGGCCGGGTGCTCGACTCGATGTTCCTCGACGGCCTCGAAGACGCCTACGACAAGGGCCGCCTGATGGG
Amino Acid Sequence
>3-hydroxy-2-methylbutyryl-CoA dehydrogenase
MQIENKVFIVTGGASGLGAATAELLVNAGAKVMLVDMNAEALAAQAQRLGAQSVVADISNEAAAEAAVQATVKAFGSLNGLVNCAGIVRGEKILGKNGPH ALSSFAQVINVNLIGSFNMLRLAAAAIAESEANADGERGVIINTASVAAFDGQIGQAAYSASKGAIASLTLPAARELARFGIRVMTIAPGIFETPMMAGM TPEVRESLAAGVPFPPRLGKPAEYAALVRHIIENSMLNGEVIRLDGALRMAAK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site