Pseudomonas sp. H1h, U862_RS0107695

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. H1h Contig9, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CAGGTAATCGAGGCGGGGGATGACCGCAGTGGACTCGATGTCGACATTCGGCACCTTGCCGCCCAACGAACTGATGTTGAGCTTCGTCGACTTGTAATGG TTGTAGTAGAGGTTGAACGCGACCATGTTCTCCGGAAGGCTGTCGACTTCCAGCGGCAGCATGAAGAAACCGTCAGTGCCGGGGCCGATGTTGTCGACGC CGGCTTCGGTGGCCAGGGCCGGAAGGGTCGCGGTGCAACCGAGCAATGTCAGTGCCAGACGCAAGGGGAGTGGGGCGCGGTTCGGGCTCATGGCTGTCCT CGTTATTATTGTGGTGGGACGTGGCGCCGCACGTAGAACGCCCGGCACCATAGAAATAAGCGCTTGGCGTGCGCCGGGGCAGGGTATTGGCGGACAGTTA GGGGGACTTCTGCGGACAGTAGGCAAACCCTGTGCTAACTTCCTTCGACATAACCGGTTACAAAAATAACAATCAAGCGTGATCCGGAATGTCAGCCCCC
DNA Sequence for Gene
>U862_RS0107695
ATGAACGTAAAAGTCCAAGACCCGACCTTCGAAATGGCGCTGGTGTCGCCGTTCCTCCTGCAAACCCTCGCCGAAGTCGTGCAGAACAAGGGCATCGACC CGGAAAGCCTGTGCCGTGGCCTGGGCTTCACGCTTGAAGATCTGCAGGATCCGGCGCAACGGATTTCCTATCGCCAGGCCGTGGCGATGATTCAGCGCGC GCTCAAAGTGCTGCCCAATCAGGGCCTCGGTCTGTGGGTGGGCGCGCAGAACGTGCTGGGTACGCTGGGGCTGCTCGGGCATGTGTTGTCGCTGTGCAAG ACCTTGCGCGATGCCTTTGCCTTGGGGATTCGTCATCAGCACACCTCTGGCGGGATCGTGGTGTCGAGTGTTGATGTGGTGGGCGCTCAGGTGCACCTCG ATGCCGAGTGCCGCTTGCCGTTCGCTGAAGTTCAGGTGTTCGCCGTCGAGGAGTTTTTCGCCAGCCTGCTGGTGTATGGCCGGGCACTGGCCGGCAGCGA ATTCAAGCCGATCGCCGTGGAGTTCGTGCACGCCGCGCCGGACTATCTGAGCGAATACCACCGCTTGCTCGGGCCAGACGTACGCTTCGGCTGCCTGCAC AACCGCATGCTGATCGATGCGCAGTGGCTGGACGTGAACCTGCCCAATCATCACTCCCTGGCGCTGCGTCAGGCTGTGGCCTTGCTGGAGCTGGAAGCGG CGCAGGTGCACCAGAAACTCGATCTGATTCAGGCGGTGGAACGGGCGATTGCCCGGGACCTGAGCCGGGGCAGCCATATCGAGAAGATCGCCGGCGACCT GAACATGAGCAGCCGCACCTTGCGTCGCCGCCTGACCGAGCACGCACTGACCTTCGAGGCTTTACTGGAACAGGTGCGTCAGGCACGGACGATGAGTCTG CTGGCCAATCCGGACATGCCGATCGAGCGCATCACCGAGGAGGTCGGCTACAGCGACGTGCGCAGTTTTCGTCGGGCGTTCAAACGCTGGACGGGAATGA GCCCGAGTGCGTGGCGCACCGAGAGCGCTGCCGCTATTTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AGGATCAAAGGATCGCAGCCTGCTTCAACCCCACAAATCCTCCGGCTACAGGTAAACTCCCGCGCACTTTCCCAAGGAGTTCACATGAGTTACTACCAGC CGGGCATCCTCGCCACCCCAGTTCCTGCGCAAGCACGTCACCTGTTTTTCGCCCTTGAATCGGTAGAAGCACTGCCGCAGGCGATCGACAATCTGCTGAA CCTGGTGGACGGCAAGTCGGCGGTGGTCGGTTTCGGTGAGTCCCTGACCAAGGCCCTCAACGTGCAGGTTGAAGGCCTGCGCAGCTTTCCGGCCATGACC GGTGTCGGCGTGGAAAACCCGTCGACCCAGCACGCGCTGTGGGTCTGGCTGCACGGTGTCGACCGGGGTGATCTGCTCAATCGCTGCAACGCCTTCGAAG TTGCGCTGGCCCCGGCCTTGCGTCTGGTGCAGGCTCAGGAAGCCTTCCGCCACAAGGATGGCCACGACCTGACCGGCTACGAAGACGGCACCGAGAACCC
Amino Acid Sequence
>AraC family transcriptional regulator
MNVKVQDPTFEMALVSPFLLQTLAEVVQNKGIDPESLCRGLGFTLEDLQDPAQRISYRQAVAMIQRALKVLPNQGLGLWVGAQNVLGTLGLLGHVLSLCK TLRDAFALGIRHQHTSGGIVVSSVDVVGAQVHLDAECRLPFAEVQVFAVEEFFASLLVYGRALAGSEFKPIAVEFVHAAPDYLSEYHRLLGPDVRFGCLH NRMLIDAQWLDVNLPNHHSLALRQAVALLELEAAQVHQKLDLIQAVERAIARDLSRGSHIEKIAGDLNMSSRTLRRRLTEHALTFEALLEQVRQARTMSL LANPDMPIERITEEVGYSDVRSFRRAFKRWTGMSPSAWRTESAAAI
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site