Pseudomonas sp. H1h, U862_RS0107435

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. H1h Contig8, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCGCGCCTGGACCGTCTGGACTCGGCCCGTATCGGCAGCTCCCGCGCCATCACCCAGTTGATCCTCAACCTGGTCGAAGGTACGCCAATCCGTCTGTTCG ACGGTGGCGAGCAGAAGCGCTGCTTCACCGACATCGCTGATGGCGTCGAGGCACTGGCCCGCATCATCGATAACGACAACGATGTCTGCAACGGCCAGAT CATCAACATCGGCAACCCGGACAACGAAGCCAGCATCCGCCAGTTGGGCGAAGAGCTGCTGCGTCAGTTCGAAGCGCACCCACTGCGTCACAACTTCCCT CCGTTCGCCGGTTTCCGCGACGTGGAAAGCAAGGCGTTCTACGGTGCCGGTTACCAGGACGTGGAACACCGCAAGCCAAGCATTGCCAACGCCAAGCGCC TGCTGAACTGGGAGCCGACCGTGGAAATGCGCGAGACCATCGGCAATACCCTGGACTTCTTCCTGCGTGAAGCCATGCTCGAAATCGCGGACAAGAAGTA
DNA Sequence for Gene
>U862_RS0107435
ATGCAGGCAGGTCTTCGTATCGATGTCGACACCTACCGTGGCACCCGTGAAGGTGTGCCGCGACTGTTGGAGATGCTCGACGAGGCTCAGGTCAAGGCAA CGTTTTTCTTCAGTGTCGGCCCGGACAACATGGGCCGGCATCTGTGGCGCCTGATCCGCCCGCAGTTCCTCTGGAAAATGCTCCGTTCCAACGCTGCCGG CCTGTACGGCTGGGACATTCTGCTGGCCGGCACTGCCTGGCCAGGCAAACCGATTGGTCGCGATCTCGGGCACCTGATGCGTCAGGCCCGGGACGCCGGT CACGAAGTCGGCCTGCACGCCTGGGATCACCATGGCTGGCAGGCCAACGCCGGGCGCTGGAGCGAGGCGCAACTGATCGAACAGATCCGTCGGGGTGTCG ACACCCTCAGCGATATTCTCGGGGAAAAGATCCAGTGTTCGGCCTCCGCCGGTTGGCGTGCGGACGAACGCGTGATCCAGGCCAAGCAAACCTTCGGCTT TCGCTACAACAGCGATTGCCGCGGGCAGAGCCTGTTCCGTCCGCTGCTGGCTGATGGCACTCCGGGCGCGCCGCAAATCCCGGTGGACATGCCGACCTTC GATGAAGTCGTCGGTCCGACCGTGGCTGCCAAGGATTTCAACGCCTTCATCCTCGACCGGTTCCGTCAGCAAGCACTCAACGTCTACACCATTCATGCCG AAGTAGAAGGGATTCTGATGGCTCAGGACTTTCGTCAATTGCTGGCCGCTGCACGCCAGCGCAGTATTGACTTCAAACCACTGGGCGACTTGTTGCCCGA GTTTTTCAACACCTTGCCCGTGGGCCACGTACAACGCGGCGCACTTGAAGGCCGTGAAGGCTGGCTGGGAGTGCAAGGCGCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTAAACGCTGGGCATTGCCGTTGCTGGTAGTACTTTGCCTGCTGGCCTATCTGCTGCCGCTGGGCACCCATGGTTTGTGGATTCCCGATGAAACCCGTTA CGCGCAAATCAGCCAGAGCATGCTGCTGAGCGGGGACTGGGTTTCGCCACACTTCATGGGGCTGCGTTACTTCGAAAAACCGATTGCCGGCTACTGGATG ATCGCCATCGGTCAGGAACTGTTCGGACAGAACCTGTTCGGCGTGCGTTTCGCTTCGGCGCTGAGCACCGGTTTGAGTGTTTTGCTGGGTTACCTGATCG CTCGCCGGTTATGGAACGACCCACGCAAGAGCTTTGTCTGCGCCCTGCTCTACATGAGCTTCACCATTGTTGCCGGCCAGGCCGGTTACGCCAACCTCGA TCCGCAATTCACCTTCTGGGTCAACCTGAGCCTCGTCGCGCTGTGGTTTGCGCTGGACAGCCGCTCTGGCGGGCAACGCTTCGCAGCGTGGGCGGTACTG
Amino Acid Sequence
>4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase
MQAGLRIDVDTYRGTREGVPRLLEMLDEAQVKATFFFSVGPDNMGRHLWRLIRPQFLWKMLRSNAAGLYGWDILLAGTAWPGKPIGRDLGHLMRQARDAG HEVGLHAWDHHGWQANAGRWSEAQLIEQIRRGVDTLSDILGEKIQCSASAGWRADERVIQAKQTFGFRYNSDCRGQSLFRPLLADGTPGAPQIPVDMPTF DEVVGPTVAAKDFNAFILDRFRQQALNVYTIHAEVEGILMAQDFRQLLAAARQRSIDFKPLGDLLPEFFNTLPVGHVQRGALEGREGWLGVQGA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site