Pseudomonas sp. H1h, U862_RS0107430

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. H1h Contig8, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGCGAACGCAGCACGTTCATCCCGATCCTGGCCAACAGCTTCGCCCGTCACACCACCGAAATCGTCGTGGCCCACGCCGAGCGTGAACACGGCGACTCGA AATACAGCCCGATGCGCCTGATCAACCTGATGTTCGATCTGGTCACCTGCATGACCACCACCCCGCTGCGCCTGCTGAGCATCGTCGGCTTTGCCATGGC CGGCCTGGGTGTGTTGTTCGCCGTTGCACTGATCATTCTGCGTCTGGCCTTCGGTGCCGGTTGGGCCGGCGACGGTACCTTCGTGCTGTTCGCCGTGCTG TTCGTGTTTACCGGTGGCCAGTTCATCGGCATGGGGCTTTTGGGTGAATACCTGGGCCGTATGTACAGCGATGTGCGTGCCCGCCCACGTTTCTTCATCG AAAAGGTGTTGCGCAGCCAGCCGGCCGATCCGGCCCCTGCCGTCACCGTTGATGGTCTTTCTTCTACCGCTACTTCTTCCACTTCCGATCAGGTTCTCTC
DNA Sequence for Gene
>U862_RS0107430
ATGAGTGCAAAAACTGTTGTCTTCGCCTACCACGATATTGGCTGCGCCGGCATTGAAGCCCTGCTCAACAGCGGCTATGACATTGCAGCAGTGTTCACTC ACGCCGATGATCCGAAAGAAAACGCTTTCTATGCATCGGTTGCACAACTGTGCGCCAGCAAAGGCATCCCGGTGCACGCGCCGGAAGACGCCAACCACCC ACTGTGGATCGAGCGCATCGCCAAGCTGGACCCGGAGTACATTTTCTCCTTCTACTATCGCAACCTGCTGAGCGAGCCACTGCTGGCCCTGGCCAAAAAA GGCGCGTTCAACCTGCACGGCTCGCTGCTGCCACGCTACCGTGGCCGCGCTCCGGCGAACTGGGTGCTGGTCAACGGCGAAACCGAAACCGGCGTCACCC TGCACCGCATGGTCAAACGTGCTGATGCCGGCGCCATCGTTGCCCAGCAGCGCGTTGCCATCGAGCGCAGCGACACCGGCCTGACCCTGCACGCCAAACT GCGCACGGCCGCCAGCGACCTGCTGCGCGACACCCTGCCGAACATGCTGCAAGGCAAGATCACCGAAACCCCGCAGGACGAATCCAAGGCCACCGTATTT GGCCGTCGTACCCCGGCAGACGGCAAACTGGTCTGGGCCAAACCGGCCGAAGAACTGTTCAACCTGGTGCGCGCCGTCACCCGTCCATACCCGGGCGCCT TCTGCGCCGTGGGCGAGCACAAGCTGATCGTCTGGAGCGCCGAAGTCGTCAAGGGCAACGAAGGTCAGGCACCTGGCCGCGTGATCAGCGTCGATCCGCT GCGCATCGCTTGTGGTCAAGACTCGCTGGTGATCAACGCCGGTCAGCGCAACGACAACGGTCTGTACCTCAGCGGCCCGCAACTGGCCAACGAACTGGGT CTGGTTGACGGTTCGCTGCTGCGCGGTGCCGAGTCCGGTCGTGCACCACGTCGCACCCGCGTGCTGATCCTCGGTGTCAACGGCTTCATCGGTAACCACC TGTCCGAGCGTCTGCTGCGTGACGACCGCTACGAAGTCTATGGTCTGGACATCGGTTCCGACGCTATCGAGCGTCTGCGCAGCCACCCCAACTTCCACTT CGTTGAAGGCGACATCAGCATTCACTCCGAGTGGATCGAGTACCACATCAAGAAATGCGACGTGGTCCTGCCGCTGGTGGCCATCGCCACCCCGATCGAA TACACCCGCAACCCGCTGCGCGTATTCGAACTGGACTTCGAAGAAAACCTGAAACTGGTTCGCTACTGCGTCAAGTACAACAAGCGCGTGATCTTCCCGT CGACTTCCGAAGTCTATGGCATGTGCCAGGACAAGAACTTCGACGAAGACAGCTCGAACCTGATCGTCGGTCCGATCAACAAGCAACGCTGGATCTACTC GGTCTCCAAGCAACTGCTGGACCGCGTGATCTGGGCTTACGGCGCCAAAGGCCTGAATTTCACCCTGTTCCGTCCGTTCAACTGGATGGGCCCGCGCCTG GACCGTCTGGACTCGGCCCGTATCGGCAGCTCCCGCGCCATCACCCAGTTGATCCTCAACCTGGTCGAAGGTACGCCAATCCGTCTGTTCGACGGTGGCG AGCAGAAGCGCTGCTTCACCGACATCGCTGATGGCGTCGAGGCACTGGCCCGCATCATCGATAACGACAACGATGTCTGCAACGGCCAGATCATCAACAT CGGCAACCCGGACAACGAAGCCAGCATCCGCCAGTTGGGCGAAGAGCTGCTGCGTCAGTTCGAAGCGCACCCACTGCGTCACAACTTCCCTCCGTTCGCC GGTTTCCGCGACGTGGAAAGCAAGGCGTTCTACGGTGCCGGTTACCAGGACGTGGAACACCGCAAGCCAAGCATTGCCAACGCCAAGCGCCTGCTGAACT GGGAGCCGACCGTGGAAATGCGCGAGACCATCGGCAATACCCTGGACTTCTTCCTGCGTGAAGCCATGCTCGAAATCGCGGACAAGAAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGCAGGCAGGTCTTCGTATCGATGTCGACACCTACCGTGGCACCCGTGAAGGTGTGCCGCGACTGTTGGAGATGCTCGACGAGGCTCAGGTCAAGGCAAC GTTTTTCTTCAGTGTCGGCCCGGACAACATGGGCCGGCATCTGTGGCGCCTGATCCGCCCGCAGTTCCTCTGGAAAATGCTCCGTTCCAACGCTGCCGGC CTGTACGGCTGGGACATTCTGCTGGCCGGCACTGCCTGGCCAGGCAAACCGATTGGTCGCGATCTCGGGCACCTGATGCGTCAGGCCCGGGACGCCGGTC ACGAAGTCGGCCTGCACGCCTGGGATCACCATGGCTGGCAGGCCAACGCCGGGCGCTGGAGCGAGGCGCAACTGATCGAACAGATCCGTCGGGGTGTCGA CACCCTCAGCGATATTCTCGGGGAAAAGATCCAGTGTTCGGCCTCCGCCGGTTGGCGTGCGGACGAACGCGTGATCCAGGCCAAGCAAACCTTCGGCTTT
Amino Acid Sequence
>UDP-4-amino-4-deoxy-L-arabinose formyltransferase
MSAKTVVFAYHDIGCAGIEALLNSGYDIAAVFTHADDPKENAFYASVAQLCASKGIPVHAPEDANHPLWIERIAKLDPEYIFSFYYRNLLSEPLLALAKK GAFNLHGSLLPRYRGRAPANWVLVNGETETGVTLHRMVKRADAGAIVAQQRVAIERSDTGLTLHAKLRTAASDLLRDTLPNMLQGKITETPQDESKATVF GRRTPADGKLVWAKPAEELFNLVRAVTRPYPGAFCAVGEHKLIVWSAEVVKGNEGQAPGRVISVDPLRIACGQDSLVINAGQRNDNGLYLSGPQLANELG LVDGSLLRGAESGRAPRRTRVLILGVNGFIGNHLSERLLRDDRYEVYGLDIGSDAIERLRSHPNFHFVEGDISIHSEWIEYHIKKCDVVLPLVAIATPIE YTRNPLRVFELDFEENLKLVRYCVKYNKRVIFPSTSEVYGMCQDKNFDEDSSNLIVGPINKQRWIYSVSKQLLDRVIWAYGAKGLNFTLFRPFNWMGPRL DRLDSARIGSSRAITQLILNLVEGTPIRLFDGGEQKRCFTDIADGVEALARIIDNDNDVCNGQIINIGNPDNEASIRQLGEELLRQFEAHPLRHNFPPFA GFRDVESKAFYGAGYQDVEHRKPSIANAKRLLNWEPTVEMRETIGNTLDFFLREAMLEIADKK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site