Pseudomonas sp. H1h, U862_RS0105090

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. H1h Contig6, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGGCGGAAACCTTCTTTCATGCGTAGCCCAAGCCCCGCGCAGCACCGGAAACTGTCGCCAGAATCACGCTCGGCACCAGCAAACCGACCCACGCCGACCA CGCCGTGCGACAGGCGAAACACCAGAGCACTGCGACCAGATAGACCAAAAAGGAAATGGTCATGCCGGTCACCACCGCTTCGGCGCGGCTCAACGGCAGC CACAGCGTCAGGGTGACACTGGCCAGCGCCGCGACCAGATAGCCGCCAAACACCGCTGCCAGCACCCGTGAGGTGACGGCCAGACGATAGGACATGGGAA GTGAGGCGAGTTTGCCTTTCATGTTTCGACCCTGAAACGAAAAAACGTCCGGCCGACAAGCCGAACCAACAGGCGAGCAATATTAATGATAAATATTCTC ATACGCAAAAGCATCTGATTGCCGGGCGACCACGCACCCCCATACAATGCGAACAGTTCTTGTTCTCTAACGCGTGTCGCATGCGCCCGGAGTAGTACCG
DNA Sequence for Gene
>U862_RS0105090
TTGCCGTCCGTCCATCCCGTCGAATCGCTCTACCACGACCACCACAGCTGGCTCACCGGCTGGTTGCGGCGCAGACTCGGCTGCCCGGACAGCGCGGCGG ATCTGGCCCAGGACACTTTCATTCGTGTGCTCAGCGCCCGCGAGCCAGCGCTGATCATCGAGCCGCGCGCCTTCCTCACCACCCTCGCCAAACGCGTACT GTTCAATCATTACCGCCGCCAGGACCTGGAACGCGCCTACCTCGAAACCCTGGCGCAGATGCCGGAAGTAGTCGCGCCTTCGGAAGAAGACAAAGCGATC ATTCTGCAAACACTGATCGAGCTGGATCAGTTGCTCGACGGCCTGCCGCGCCTGGTCAAGCGCGCCTTCCTGCTGGCGCAGGTCGATGGCCTGACCTACC CGCAGATCGCCGCTGAACTGGACATCTCGGTGGCCACGGTCAAACGTCATCTGAACAAGGCAGCGATGCGCTGCTACTTCGCCCTATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCGCGTCCCGGATTTCTCTGCACAAGTGGCCGAGCAGGCCGTGCACTGGCTGATGGAAATGCAGCAAGGCACGCTGACCCCGCGCCAGCAACAGGCCTG GCAACAATGGCTGGACGCGCACAGCGAGCATCGCCGGGCGTGGGAACACATTCAGCGGGTCAATCAGCGCTTGCGCGGTGTGTCCTCGCCGCTGGCACAT GCGGCGTTGAACGGGCCGAAATCCAGCAGCCGCCGTCAGACGCTGAAACTGCTGCTGATTCTCGGCGCGGGCTCGGCCGTCACCTGGAGCGTGCGCGAGC ACAATCCGCTGCCGGCGCTGCTCGCCGATTACCGCAGCCCGGTGGGTGAGCGACGTACGGTGGCGCTGGGCGCAGGTAATCAGTTGCAGCTCAACACCGC GAGTGCGGCGGACGTGGACGGCGTACAACGGCTGATCCGTTTGCGGGAAGGCGAGATTCTGCTGACGGCTGCACAAGCGTTCGAAGTACACACAGCACAA
Amino Acid Sequence
>RNA polymerase sigma factor
MPSVHPVESLYHDHHSWLTGWLRRRLGCPDSAADLAQDTFIRVLSAREPALIIEPRAFLTTLAKRVLFNHYRRQDLERAYLETLAQMPEVVAPSEEDKAI ILQTLIELDQLLDGLPRLVKRAFLLAQVDGLTYPQIAAELDISVATVKRHLNKAAMRCYFAL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site