Pseudomonas sp. H1h, U862_RS0101885

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. H1h Contig2, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GTGCCGAGTGGTCAACTCGCCGTTGGCTTGCAAGGTGCTGAGCAAACCGGTCTGCGGGAACTGACGCATTTTCAGCACATATTCGATTGCCGGGCCATCG CCGCCCAGTTGCGGCGCTTCGACGCTGCCGGTCACCGGCAACACTTCCAGATACAAATCATCGGTCAGGCGCTGGTTCAGGCGCAGTTCTTCGCCGCAGA AGTGCTCGCGCGATTCGAGGCTGGTGAAGTCGAGGAAGCCGAAATTCACCGGCTTCTTCACTTTATAGGCAAAGGGGCCAGTGAGGATCACCCACGAGAT GTGGGTTTCGATGACCTGGAACCCTTCGACGGGGTGCGGGTAGAGGGCCGGGTTTTGCAGGGCAGCGATCAGGGACTGGCTCACGGGCGATCCTTCAGAG ACTGGGAAATTCGAGGTCGCCATTATGGCCGCTCGCCAGCCCGACGCAAACCTCGGAGCGCTCCTGTTGAGTATGAATAAAGTGCGTATAATCCGCCGCC
DNA Sequence for Gene
>U862_RS0101885
ATGACTCGAACTCGATCCCCTCGTACCAAGAAAAAACCACCTGCCAGGGGCCTGCGCCCGTGGTTGGGTTGGGCCATTAAACTCAGCCTGGTCGGCCTCG TGGTGCTGGCCGGCTTCGCCGTTTACCTCGATGCCGTGGTGCAGGAGAAGTTCTCCGGCAAGCGCTGGACCATCCCGGCCAAGGTCTACGCGCGTCCGCT CGAGCTGTTCGTCGGACAAAAGCTCAGCAAGGATGATTTCCTGACCGAGCTCGACGCGCTCGGCTATCGTCGCGAAGCCGTGAGCAACGGTCCCGGCGCT GCCGCAGTCAACGGCAATACCGTCGATCTGAACACTCGCGGCTTCCAGTTCTATGAAGGTCTGGAAAAAGCCCAGCCGGTGCGCGTGCGCTTCTCCGGCG ATTATGTGGCCGAGCTTTCGGGGCTCAATGGTTCGAAGCTGTCCGTGGTGCGGCTTGAGCCGCTGATGATCGGCGGCATTTACCCTAAAAATCTTGAAGA CCGAATCCTGATCAAGCTCGATCAGGTGCCGCCGTACCTGCTGGAAACCCTGGTTGCGGTTGAAGACCGCGACTATTACAGCCACTGGGGCGTATCGCCG AAATCGATTGCCCGGGCCATTTGGGTCAACACCTCTGGCGGCAAGATGACCCAGGGTGGCAGTACGCTGACCCAGCAGTTGGTCAAGAACTTCTACCTCA CCAACGAACGCAGCCTGAGCCGCAAGCTCACCGAAGCGATGATGGCGATGCTGCTGGAACTGCATTACGACAAGAAGGAGATTCTTGAGGCCTACCTCAA CGAAGTCTTCGTCGGGCAGGACGGTCAGCGTGCGGTGCACGGTTTCGGTCTTGCCAGCCAGTTCTTCTTCGGCCAGCCATTGTCCGAGCTGAAACTGCAT CAGGTAGCGCTGTTGGTCGGCATGGTCAAAGGCCCGTCCTATTACAACCCGCGCCGCAATCCTGAGCGCGCGCTCGAGCGTCGTAACCTGGTGCTCGACG TGCTTGAGCAGCAAGGCGTGGCGACTGCCGAACAGGTCGAAGCTGCGAAGAAAATGCCACTGGGTGTAACGACTCGCGGCAAGCTCGCTGATAGCTCATT CCCGGGCTTCATCGATCTGGTCAAACGCCAGTTGCGTGAAGACTATCGCGACGAGGACTTGACCGAAGAGGGCCTGCGGATCTTCACCAGTTTCGACCCG ATTCTGCAGATGAAAGCCGAGGCCTCGGTCAACGACACCTTCAAGCGCCTGGCTGGACGCAAGGGCTCCGATGATGTGGAAGCGGCGATGGTCGTGACCA ATCCGGAAACCGGCGAAGTCCAGGCAATGATTGGTAGCCGTCAGGCCAGCTACGCCGGATTCAACCGGGCGCTGGATGCCGTGCGGCCGATCGGTTCCCT GGTGAAGCCCGCGGTGTATCTGACTGCACTGGAGAAACCGAGCCACTACACGCTGACCAGTTGGCTGTCGGATGATCCGTTGTCGGTCAAAGGCGCGGAC GGCCAGGTGTGGAAGCCGCAGAACTATGATCGCCGCTCACACGGCACGGTCTTCCTCTATCAAGGACTGGCGCACTCCTACAATCTGTCGACCTCGCGTC TGGGCCTGGAAGTCGGTGTGCCGAATGTGCTCAAGACCCTTGCGCGTCTGGGCGTGACCCGGGAATTCCCGGCGTTCCCGTCGATGCTGCTGGGGGCTGG CGGCATGACCCCGATCGAAGTGGCGACCATGTACCAGACCCTCGCCAACGGTGGTTTCAATACGCCGATGCGCGGGATTCGCAGCGTACTGACCGCCGAG GGCGAGCCGCTCAAGCGTTATCCGTTCCAGATCGAGCAGCGTTTCGATCCGGCGTCCATCTACCTGATCCAGAACGCCATGCAGCGGGTGATGCGTGAAG GTACCGGCAGCTCGGTTTATAACGTGCTGCCCAAGACCCTGACGCTGGCCGGCAAGACCGGTACCAGTAACGATTCGCGTGACAGCTGGTTCGCCGGTTT CAGTCAGGACCTGCTGGCAGTGGTCTGGCTCGGTCGTGACGACAACGGCAAGACCCCGTTTACCGGGGCAACCGGTGCATTGCAGGTCTGGACCAGTTTC ATGCGCAAGGCCGATCCGCTGCCGCTGGACATGCCGCAGCCGGACAACATCGTCCAGGCGTGGGTCGATTCGCGTACCGGACAAGGCTCTGACGCCAACT GTCCGGGGGCGGTGCAGATGCCGTATATTCGCGGCAGCGAACCGCCACCCGGCGCCGCGTGTGCAAGCGAAACGCCTGCTTCGCCGGAGTCGGTGATGGA TTGGGTCAAGGGCTGGATGAATTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCAAAGAGGGTTTCAAGTGAACAAGTGGTTGATTCCAGCGGTGACCGCCGTGGCTTTGCTCAGCGGCTGCTCTACCGTACAGCGTGGTTCGATCCCGGTG GTGGATTCCGGCACGACCGTGTCCAACAGCGAACGCCTGTCGGCCAACGGCGGTTTCCGCAAGACGACGGTCAAGCGCCCAGTACAAGGCCAGGCGCAAT CCCAGGCCATCCCTCAGGGTGATACTGGCGTAGTGGTGATGGTGCCGGGTGGCGGCGCCACGACTTCGGCTCCGATCAGCACCTCGCCGATCGTTCCGGG CCCGGCGTCCGGCGGTATCACGCCGGGGCCGTACACCCCGTCGCCGGTCGAGTCGGCGCCGATCAACACGGGCAGCTACAGCATGCCCTCGACGCCAAGC GGGATTCCTTCGGCCAGCAGTGCCGGTGGTCTGTCGGCGGATGAGCAACTGGATGGCCCGGTGCTCGCCTTGCTGACTACTGCACAGCAGCAACAGGCCG
Amino Acid Sequence
>penicillin-binding protein
MTRTRSPRTKKKPPARGLRPWLGWAIKLSLVGLVVLAGFAVYLDAVVQEKFSGKRWTIPAKVYARPLELFVGQKLSKDDFLTELDALGYRREAVSNGPGA AAVNGNTVDLNTRGFQFYEGLEKAQPVRVRFSGDYVAELSGLNGSKLSVVRLEPLMIGGIYPKNLEDRILIKLDQVPPYLLETLVAVEDRDYYSHWGVSP KSIARAIWVNTSGGKMTQGGSTLTQQLVKNFYLTNERSLSRKLTEAMMAMLLELHYDKKEILEAYLNEVFVGQDGQRAVHGFGLASQFFFGQPLSELKLH QVALLVGMVKGPSYYNPRRNPERALERRNLVLDVLEQQGVATAEQVEAAKKMPLGVTTRGKLADSSFPGFIDLVKRQLREDYRDEDLTEEGLRIFTSFDP ILQMKAEASVNDTFKRLAGRKGSDDVEAAMVVTNPETGEVQAMIGSRQASYAGFNRALDAVRPIGSLVKPAVYLTALEKPSHYTLTSWLSDDPLSVKGAD GQVWKPQNYDRRSHGTVFLYQGLAHSYNLSTSRLGLEVGVPNVLKTLARLGVTREFPAFPSMLLGAGGMTPIEVATMYQTLANGGFNTPMRGIRSVLTAE GEPLKRYPFQIEQRFDPASIYLIQNAMQRVMREGTGSSVYNVLPKTLTLAGKTGTSNDSRDSWFAGFSQDLLAVVWLGRDDNGKTPFTGATGALQVWTSF MRKADPLPLDMPQPDNIVQAWVDSRTGQGSDANCPGAVQMPYIRGSEPPPGAACASETPASPESVMDWVKGWMN
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site