Pseudomonas sp. H1h, U862_RS0100990

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. H1h Contig2, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AGACCAGCTGTAAGGGATTGCTGTGCGACTGCGACTGATCGCCGTCGGTTCACGCATGCCCAAGTGGGTGGAAGAAGGCTGGCATGAATATGCCAAGCGT CTTCCGTCCGAGCTGGCGCTGGAACTGGTGGAAATTCCGCTCAATACCCGTGGCAAGAACGCCGACGTGGCCCGTTTCATCCGCCAGGAAGGCGAAGCCA TGCTGGCCAAGGTCGGGCCGAACGAGCGGATCGTCACGCTGGAAGTCCACGGCAAGCCCTGGAGCACCGAGCAACTGGCGGTCGAGCTTGACCGTTGGCG GCTGGATTCGCGCACGGTCAACTTCATGGTCGGTGGCCCCGAAGGGCTGGCGCCGGAGGTCTGTGCCCGCGCCGATCAGCGCTGGTCGCTGTCGCCGCTG ACCTTGCCGCACCCGCTGGTGCGGATCCTGATCGGCGAACAGTTGTACCGTGCCTGGACCGTGCTGTCCGGTCACCCTTACCACAAGTAGTCCTGCCCTC
DNA Sequence for Gene
>U862_RS0100990
ATGTCTCAGCCGATCCGCATCAAGGACCACGAAAAGGACGCCCGCCTGGTGCGTAGCCGCGTCGTGTTCGGGGCCATTGCGGTCATGCTGTTGATCTGCG TACTGATTGCGCGGCTGTACTACTTGCAGGTGATCCAGTACGAGTACCACTCGACGCTCTCGGAAAACAACCGCGTCCATGTGCAGCCGATTCCGCCGAC CCGCGGGCTGATCTTCGACCGCAACGGCGTGGTGGTGGCGGACAACCGCCCCAGCTTCAGCCTGAGCATGACCCGCGAGCGCTCCGGCGACTGGCAACAA GTGCTCGACGCGATCGTCGAAGTGCTGCAACTGACGCCCGAGGATCGGGTGATCTTCGAGAAACGCATGCGTCAGGGGCGCCGGCCGTTCGAGCCGGTGC CGATCCTGTTCGAGCTGACCGAAGAGCAGATCGCCCGGATCGCGGTGAATCAGTTCCGCCTGCCCGGGGTGGAAGTGGTCGCGCAATTGGTCCGCCACTA CCCGCAGGGCGCGCATTTTGCGCATTCGGTGGGTTACATGGGGCGGATCAACGAGAAAGAGCTCAAGACCCTCGACCCGGTCAACTACAGCGGCACCCAT CACATCGGCAAGACCGGCATCGAGCGTTTTTACGAGCCGGAACTGCACGGGCAGGTGGGTTACGAGGAAGTCGAGACCAACGCTCGAGGCCGCGTATTGC GCGTGCTCAAGCGTACCGATCCGATTCCCGGCAAGGACATCGTCCTTAGTCTGGACATCAAATTGCAGGAAGCGGCTGAAGCCGCTTTGGGCGGGCGGCG CGGTGCGGTGGTGGCGCTCGATCCGAAGACTGGCGAAGTGCTGGCGATGGTCAGCCAGCCGAGCTTCGACCCCAACCTGTTCGTCACCGGCATCAGCTTC AAGGCGTACGCCGAGCTGCGCGACTCCATCGATCGGCCGCTGTTCAACCGGGTGCTGCGTGGCCTGTATCCGCCAGGTTCGACAATCAAACCGGCGGTGG CGATTGCCGGTCTCGATTCGGGCGTGGTGACAGCGTCGAGCCGGGTGTTCGACCCCGGTTACTACATGCTGCCCAACTACGATCACAAATACCGCAACTG GAACCGCACCGGTGACGGCTTCGTCGACCTCGACACGGCGATCATGCGTTCCAACGACACCTACTTCTATGACCTGGCGCACAAGCTGGGCATTGATCGG CTGTCGGCCTACATGAACAAGTTCGGCATCGGCCAGAAGGTCTCGCTGGACATGTTCGAAGAATCTCCCGGCCTGATGCCGTCGCGCGAGTGGAAGCGCG CGACTCGCAAGCAGGCGTGGTTCCCGGGCGAAACCCTGATTCTGGGGATCGGCCAGGGCTACATGCAGTCCACGCCGTTGCAATTGGCGCAAGCCACGGC GCTGGTGGCCAACAAAGGCATCTGGAACCGCCCGCACCTGGCCAAGACCATCGAAGGTGCAAAACCGGTGGACGAGAACCCGATACCGGACATCGTCCTG CGCGATCCGTCGGACTGGACCAAGGTCAACCACGGCATGCAGCAGGTGATGCACGGCGCCCGGGGGACCGCGCGCAAGGCGGCGGTCGGTGCGCAATACC GGATCGCCGGCAAGTCGGGTACGGCCCAGGTGGTGGCGATCAAGCAAGGCGAGAAATACGACCGTTCCAAGGTTCAGGAGCGCCACCGCGACCACGCCTT GTTCGTTGGATTTGCCCCGGCCGACAACCCGAAAATCGTCGTCTCGGTGATGGTCGAGAACGGTGAGTCCGGGTCGGGTGTCGCCGCGCCGGTGGTGCGT CAGGTCATGGATGCCTGGCTTCTGGACCAGGATGGTCGGTTGAAGGCCGAATACGCCGGTCCTATCAGTGCGGAGGCTACGGCCCGTGATGAATAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TTTTGATCGCATGCTCTCCAGCGAGGATGTGATGCGTCGCCGTGCGACGCTGCTGCAACGTCTGCATATCGATGGTCCTTTGTTGATCCTGCTGCTGATC CTCGCCGCAGGCAGTCTGTTCGTGCTGTATTCGGCCAGCGGCAAGAGCTGGGACCTGCTGGGCAAACAGGCCACTTCGTTCGGCATCGGCCTGGTGTCGA TGATCGTCATCGCCCAGTTCGAGCCGCGGTTCATGGCCCGTTGGGTGCCGCTCGGTTACGTGGTCGGCGTGGTGTTGCTGATGGTGGTGGACATCATGGG CCACAACGCCATGGGCGCCACGCGCTGGATCAACATCCCCGGGGTGATCCGCTTCCAGCCCTCGGAATTCATGAAGATCCTGATGCCGGCGACGATCGCC TGGTACCTGTCCAAGCGCACGCTGCCGCCGCAGCTCAAGCACGTGGGCATCAGCCTGCTGCTGATCGGCGTGCCGTTCATTCTCATCGTGCGTCAGCCCG
Amino Acid Sequence
>penicillin-binding protein 2
MSQPIRIKDHEKDARLVRSRVVFGAIAVMLLICVLIARLYYLQVIQYEYHSTLSENNRVHVQPIPPTRGLIFDRNGVVVADNRPSFSLSMTRERSGDWQQ VLDAIVEVLQLTPEDRVIFEKRMRQGRRPFEPVPILFELTEEQIARIAVNQFRLPGVEVVAQLVRHYPQGAHFAHSVGYMGRINEKELKTLDPVNYSGTH HIGKTGIERFYEPELHGQVGYEEVETNARGRVLRVLKRTDPIPGKDIVLSLDIKLQEAAEAALGGRRGAVVALDPKTGEVLAMVSQPSFDPNLFVTGISF KAYAELRDSIDRPLFNRVLRGLYPPGSTIKPAVAIAGLDSGVVTASSRVFDPGYYMLPNYDHKYRNWNRTGDGFVDLDTAIMRSNDTYFYDLAHKLGIDR LSAYMNKFGIGQKVSLDMFEESPGLMPSREWKRATRKQAWFPGETLILGIGQGYMQSTPLQLAQATALVANKGIWNRPHLAKTIEGAKPVDENPIPDIVL RDPSDWTKVNHGMQQVMHGARGTARKAAVGAQYRIAGKSGTAQVVAIKQGEKYDRSKVQERHRDHALFVGFAPADNPKIVVSVMVENGESGSGVAAPVVR QVMDAWLLDQDGRLKAEYAGPISAEATARDE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site