Pseudomonas aeruginosa PS50, Q095_06106
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PS50 adkgi-supercont1.2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGCCGACCGTGTTCACCGATTGCCGCGACGACATGACCATCGTCCGCGAGGAAATCTTCGGCCCGGTGATGAGCATCCTGGTCTATGACGACGAAGACGA GGCGATCCGCCGCGCCAACAATACCGAGTACGGCCTCGCCGCCGGCGTCGTGACCCAGGACCTGGCCCGCGCCCACCGCGCCATCCATCGCCTGGAAGCC GGCATCTGCTGGATCAATACCTGGGGCGAGTCGCCGGCGGAAATGCCGGTCGGCGGTTACAAGCAATCCGGTGTCGGTCGCGAGAACGGTCTCACCACCC TGGCTCATTACACTCGCATCAAGTCCGTGCAAGTGGAGCTGGGCGACTACGCCTCGGTGTTCTGAGCCTCGACGCAGCGCTCGAACCCCTAACCAGGCCG GTCCCAGGCAACGCTCCCTGACACCGGCCATTCCGAACTTCCAGACACCGGCGCGCCAGCGTCGCGGCCGGTGTCATGCCGAGAAAAGAGGAAGGCCTGC
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| DNA Sequence for Gene |
>Q095_06106
ATGTCCCAGGAATTCGACTACATCATCATCGGAGCCGGCTCTGCCGGTAACGTACTCGCTACCCGCCTCACCGAAGATGCCGACGTCAGCGTCCTGCTGC TCGAAGCCGGCGGTCCCGACTACCGCTTCGACTTCCGCACCCAGATGCCGGCGGCCCTTGCCTTCCCGCTGCAGGGGCGGCGCTACAACTGGGCCTACGA AACCGACCCCGAGCCCTACATGAACAACCGCCGCATGGAGTGCGGTCGCGGCAAGGGCCTGGGCGGCTCCTCGCTGATCAACGGCATGTGCTACATCCGC GGCAACGCCCTGGACTTCGACGGCTGGGCCAAGGAGCCGGGCCTCGAGGACTGGAGCTACCTCGACTGCCTGCCGTACTTCCGCAAGGCGGAAACCCGGG ACATCGGCCCCAACGACTACCATGGCGGCGACGGCCCGGTCAGCGTGACCACGCCGAAGGCCGGCAACAACCCACTGTTCCATGCGATGGTCGAGGCCGG CGTGCAGGCCGGCTACCCGCGAACCGATGACCTCAACGGCTACCAGCAGGAAGGCTTCGGCCCCATGGACCGGACCGTCACCCCGGAGGGCCGTCGCGCC GCCACCGGGCGCGGCTACCTGGACCAGGCCCGCGGCCGGCCCAACCTGACCATCGTCACCCACGCCCTGAGCGACCGCATCCTGTTCAGCGGCAAGCGCG CCATCGGCGTCTCCTACCTGGTGGGCAACGGCGACAACCCGGTCACCGCCCACGCCCGCCGCGAAGTATTGGTGTGCAGCGGCGCGATCGCCTCGCCGCA ATTGCTGCAACGCTCCGGCGTCGGCCCGGCGGCCCTGCTGCGCGACCTGGACATCCCGGTGGTGCATGACCTGCCGGGCGTCGGCGCCAACCTGCAGGAT CACCTGGAACTCTACCTGCAGTACGCCTGCAAGCAGCCGGTGTCGATCTACCCGGCGACCAAATGGTGGAACCAGCCTGCCATCGGTGCCCAGTGGCTGT TCCTCGGCAAGGGCCTCGGCGCCAGCAACCAGTTCGAGGCTGGCGGCTTCATCCGAACCCGCGAAGCGTTCGAATGGCCGAACATCCAGTTCCATTTCCT CCCGGTGGCGATCAACTACAACGGCAGCAAGGGCGTGCAGGAGCACGGCTTCCAGGCGCACATGGGCTCGATGCGCTCGCCGAGCCGCGGGCGCATCCAC CTGAAGTCCAGGGACCCGCGCCAGCATCCGAGCATCCTGTTCAACTACATGTCCCACGAGCAGGACTGGCAGGAGTTCCGCGACGGCATCCGGCTGACCC GCGAGATCATGAACCAGCCGGCGCTGGACCCCTATCGGGGCCGCGAGTTGAGCCCAGGGGTGAACGTGCAGTCGGACGCCGAACTCGACGAGTTCATCCG CAACCATGCGGAGACCGCTTTCCACCCATCCTGCTCGTGCAAGATGGGCAGCGACGACATGGCGGTGGTCGATGGCCAGGGACGGGTCCACGGCATGGAA GGACTGCGAGTGGTGGATGCGTCGATCATGCCGCTGATCATCACCGGCAACCTCAATGCCACCACCATCATGATGGCCGAGAAGATCGCCGACAGGATCC GCGGTCGCCAGCCGCTGCCGCGCAGCACGGCGAAGTACTACGTGGCCGGGGATGCGCCGGTACGCGGCAACCCCGTGCGGGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGAGCGCGCAAACAAGAACGCCGGCGATAGCCGGCGTTCCTGCGTCTAGCCCCGGCGTGGCGGGACCGGGCGGGTGCGCCCGCTGCCATCGATGGCGACG AACACGAACACCGCCTCGGTGACTTTGCGCCATTCGCTGGACAACGGGTCGTCGCTCCACACCTCGACCAGCATGCGGATCGAGCTGCGACCGACTTCCA GGGTCTGGGTATAGAAGGAAAGCTGGGCACCTACCGCGACCGGCACCATGAAGGCCATGCGGTCGATGGCGACGGTGGCGATACGGCCGCCGGCGATCTT GCTGGCCATGGCGGTTCCCGCCAGGTCCATCTGGGATACCAGCCAACCGCCGTAGATATCGCCGAAACCGTTGGTTTCGCGCGGCAGCGCGGTAATCTGC AAGGCCAGGTCTCCCTGGGGAATGGGGTCTTCTTGTTCAAGCTCGATCATAGGTAAGGGCCTCGTGCCCCCCGGATTTCTTGTTCAAGCGCGGTTTAGGG
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| Amino Acid Sequence |
>choline dehydrogenase
MSQEFDYIIIGAGSAGNVLATRLTEDADVSVLLLEAGGPDYRFDFRTQMPAALAFPLQGRRYNWAYETDPEPYMNNRRMECGRGKGLGGSSLINGMCYIR GNALDFDGWAKEPGLEDWSYLDCLPYFRKAETRDIGPNDYHGGDGPVSVTTPKAGNNPLFHAMVEAGVQAGYPRTDDLNGYQQEGFGPMDRTVTPEGRRA ATGRGYLDQARGRPNLTIVTHALSDRILFSGKRAIGVSYLVGNGDNPVTAHARREVLVCSGAIASPQLLQRSGVGPAALLRDLDIPVVHDLPGVGANLQD HLELYLQYACKQPVSIYPATKWWNQPAIGAQWLFLGKGLGASNQFEAGGFIRTREAFEWPNIQFHFLPVAINYNGSKGVQEHGFQAHMGSMRSPSRGRIH LKSRDPRQHPSILFNYMSHEQDWQEFRDGIRLTREIMNQPALDPYRGRELSPGVNVQSDAELDEFIRNHAETAFHPSCSCKMGSDDMAVVDGQGRVHGME GLRVVDASIMPLIITGNLNATTIMMAEKIADRIRGRQPLPRSTAKYYVAGDAPVRGNPVRA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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