Strain | Pseudomonas aeruginosa PS50 adkgi-supercont1.2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCTGTGCGAGGAAGGCGAGTCGCCGCGCGGCTACGTCGAGGTTCGGCACATCGGCAGCCAGGTACAGAAGATGGTGCAGGAGGCACTGGACGCCTTCGCC CGCTTCGATGCCGACCTGGCGCTGTCCGTGGCGCAGTACGACAAGACCGTCGATCGCGAATACAAGACCGCCCTGCGCGAGCTGGTCACCTACATGATGG AAGACCCGCGGGCGATATCCCGCGTGCTCAACATCATCTGGGCCCTGCGCTCGCTGGAGCGCATCGGCGACCATGCGCGCAACATCGCCGAGCTGGTGAT CTACCTGGTTCGCGGCACCGACGTTCGTCACATCGGTCTGACCCGCATGAAGGAAGAGGTCGAGAACAACCGCGGCGAGTGATCTTCCGCAGGCAAGGCT CCCTTGACCTGGAGCCTTGTTTCTTCGCGCGACTGCAGCAAGGCTTGGCATCCTGCCAGCAGGGGAGGCTATCCTAGGCGAACCTGTCCAGGAGAAGTCG
|
|
DNA Sequence for Gene |
>Q095_06097
ATGAGCAAAGTCAGCGCGCTAGTGGTGGATGACGCCCCCTTCATCCGAGATCTGATGAAGAAAGGGTTGCGCGACAACTTCCCCGGCCTTCATATCGAGG AGGCCGTGAACGGCCGCAAGGCCCAGCAACTGCTCAGTCGGCAGAACGTCGACCTGATCCTCTGCGACTGGGAGATGCCGGAGATGTCCGGCCTCGAACT GCTGACCTGGTGCCGTGCCCAGGAAAACCTCAAGACTACCCCGTTCATCATGGTCACCAGTCGCGGCGACAAGGAGAACGTGGTCCAGGCGATCCAGGCC GGGGTGTCGGACTACATCGGCAAGCCATTCTCCAATGACCAGCTGGTGGCCAAGATCAAGAAGGCCCTGAGCCGCAGCGGCAAGCTGGAAGCCCTGGCGG CCCACGCGCCGCGCCGGGAGATCGCCAGCGGCATGGCCAACGATTCGCTGGCCGCCCTGACCGGCGGTCGCGCCGAGGTGATCAAGCCCGCCGCCAGTCC GGCAAAACCGGCTCCCGCGCCGAAGCCGGCTTCGGCTCCCCAGGCCAGCGCGCGTCCCGCCGGCAGCGGCAACCCGCTGGGCCAGGCGCAATTGCGCCTG CCGCAGAGCAGCATGCCCTGCGTGATCAAGGCGGTCAGTCTGAAGGAAGCGCAACTGGTGGTGAAGCGCGCCGACCCGTTGCCGCAGGTGCTGGAAAGCG CGGTGCTGGACCTCGAGGAAAACAGCGACGTGGCGCGCCTGAACGGCTACCTGCACGCCATCGCCGCGCTGGAGCCGAAGCCGGATAGCGATTGGCTGCT GTTGACCCTGCGTTTCGTCGACCGCGACCCGCAGAAGCTCGACTACCTGTCGCGCCTGATCGCCCGCGGAAGTACCCAGAAGCACTACGTTCCCGGCGCC TGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GCGGTTTTTTTCCCGACGATCCGTTCACAGCCCGCTCGCTGTCGTCTCGCCCTGGCAATAAAGCGCTGCTAGTCTTGCCGATTCGGGATAACCAGAACGA CACGATCCGTGCAGTCATGCTAGGGCGCCTCCTCCTTCTCTGTGGCCTGTTCGCCGCGGCAGCTCCGGCTGCGGCCCTGACCATCTACAAGTACACCGAC GCCAATGGCGTGGTGACCTACTCCGACCGCGCCGTGGCCGGGGCGCAGGTGTTCGTCTTCCGCGACCGGATGGTCGAGCACCTGGAACGGGAAGTGAAGC TGGAGACGAAGAAGCACGCGGGTGGCGAGACCCTGCAGGTGCGCAACGACCTCTACGCGCCGGTCGAGGTCGAGTTGCGGATCCGCAACCCGCGCAATGC CGTTGGGGTGCCCGACGGGCCGATTCGCTGGGTGGTCCCGGCGCGCAGCCAGGTGCGCCTGGCGACCCTGGCGCCGCGCAAGGCCGGCAAGCCGATGAGC
|
|
Amino Acid Sequence |
>chemotaxis protein CheY
MSKVSALVVDDAPFIRDLMKKGLRDNFPGLHIEEAVNGRKAQQLLSRQNVDLILCDWEMPEMSGLELLTWCRAQENLKTTPFIMVTSRGDKENVVQAIQA GVSDYIGKPFSNDQLVAKIKKALSRSGKLEALAAHAPRREIASGMANDSLAALTGGRAEVIKPAASPAKPAPAPKPASAPQASARPAGSGNPLGQAQLRL PQSSMPCVIKAVSLKEAQLVVKRADPLPQVLESAVLDLEENSDVARLNGYLHAIAALEPKPDSDWLLLTLRFVDRDPQKLDYLSRLIARGSTQKHYVPGA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|