Strain | Pseudomonas aeruginosa PS50 adkgi-supercont1.2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AGCCCACCGGCGCCCTGGCCGACGCCATCAACGCCGCCTTCGGCTCCTTCGACAAGTTCAAGGAAGAGTTCACCAAGACTTCCGTCGGCACCTTCGGTTC CGGCTGGGGCTGGCTGGTGAAGAAGGCCGACGGCTCCCTGGCCCTGGCCAGCACCATCGGTGCCGGCAACCCGCTGACCAGCGGCGACACCCCGCTGCTG ACCTGCGACGTCTGGGAACACGCCTACTACATCGACTACCGCAACCTGCGTCCGAAGTACGTCGAGGCGTTCTGGAACCTGGTCAACTGGGACTTCGTAG CGAAGAATTTCGCTGCCTGAGTCTGATCAGAACCACGAAAAAGCCCGGCATTCGCCGGGCTTTTTCGTTTTAATCTGCGGTCCAGGAGCCATCGTCTACC CTCAGGAACTGGTAGACCTTCGCTCGTGATAGCCTCTTGAGGTAAACAAGCTCTTCCTACCGGCTTGTCTTTCGCCCTGGCGACGAACAAGGAAGGCCCC
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DNA Sequence for Gene |
>Q095_04849
TTGAAACTGGACTCCCGACACAGCCTCTCGCTCAAGCTGCTGCGTGTCGTGCTACTGGCGGCGCTGGCCGTTGGCGTAGTGCTCAGTTGCGCGCAGATCG TCTTCGACGCCTACAAGGCCAAGCAGGCGGTGAGCAGCGACGCCCAACGCATCCTCGCGATGGTCCGCGACCCTTCCACCCAGGCGGTCTACAGCCTCGA CCGGGAAATGGCGATGCAGGTCCTCGAAGGCCTGTTCCAGCACGAGGCGGTGCGCCAGGCGAGCATCGGCCATCCCGGCGAGCCGATGCTGGCGGAGAAA TCCAGGCCGCTGCTGGACCTGCCGACGCGCTGGCTGACCGACCCGATCCTCGGCCAGGAACGCACCTTCAGCATTCGACTGATCGGCCGCCCGCCCTATA GCGAATACTACGGCGACCTGAAGATCACCCTGGACACCGCGCCCTACGGCGAGAACTTCGTCACCACTTCGGAAATCATCTTCATCTCCGGCATTCTCCG CGCCCTGGCCATGGGCCTGGTGCTGTTCCTGGTCTACCACTGGATGCTGACCAAGCCGCTGTCGAAGATCATCGAGCACCTGGTCAGCATCAATCCCGAC CGCCCCAGCCAGCACCAGTTGCCGCTGCTCAAGGGGCACGAACGCAACGAGCTGGGGCTCTGGGTGACCACCGCCAACCAGTTGCTCGCCTCGATCGAAA GCAACAGCCACCTGCGTCGCGAGGCCGAGGACAACCTGCTGCGCATTTCCCAGTACGACTTCCTCACCGGCCTGCCGAACCGCCAGTTGCTGCAGCAGCA ACTCGACCAGATCCTCGACGGCGCCGGCCGCCAGCAGCGCCGGGTGGCAGTGCTGTGCCTGGGCCTCGACGATTTCAAGGGGATCAACGAGCAGTACACC TACCAGCTCGGCGACCAGCTGCTGATCGCCCTCGCCGACCGCCTGCGCGGGCACAGCGCGCGGCTCGGTTCGCTGGCGCGCCTGGGCGGCGACCAGTTCG CCCTGGTCCAGGCCGACATCGAGCAACCCTACGAGGCGGCCGAACTGGCGCAGAGCATCCTCGACGGCCTGGAAGCGCCGTTCGAGATCGACCAGCACGA GGTGCGCCTGCGCGCCACCATCGGTATCACCCTGTTCCCCGAGGACGGCGAGACCACGGAGAAACTGCTGCAGAAGGCCGAGCAGACCATGACCCTGGCC AAGACCCGCTCGCGCAACCGCTACCAGTTCTACATCGCCAGCGTGGACAGCGAGATGCGTCGCCGCCGGGAACTGGAAAAGGACCTGCGCGACGCCCTGC AGCGCCACGAGCTGCACCTCGTTTACCAGCCGCAGGTGGACTACCGCGACCACCGCGTGGTCGGCGTCGAGGCGCTGCTGCGCTGGCAACATCCGTTGCA CGGCTTCGTCCCGCCGGACCTGTTCATCCCGCTGGCGGAACAGAACGGCAGCATCTTCAGCATCGGCGAATGGGTGCTCGACCAGGCCTGCCGGCAATTG CGCGAATGGCACGACCAGGGCTTCGACGACCTGCGCATGGCGGTCAATCTTTCCACCGTGCAGCTCCACCACAACGCCCTGCCACGGGTGGTCAGCAACC TGCTGCAGGTCTACCGCCTGCCGGCGCGCAGCCTGGAGCTGGAAGTCACCGAGACCGGCCTGATGGAGGACATCTCCACTGCCGCCCAGCACCTCCTCAG CCTGCGCCGCGCCGGCGCGCTGATCGCCATCGACGATTTCGGCACCGGCTATTCCTCGCTGAGCTACCTGAAGAGCCTGCCGCTGGACAAGATCAAGATC GACAAGAGTTTCGTCCAGGACCTGCTGCAGGACGAGGACGACGCGACCATCGTTCGCGCCATCATCCAGCTCGGCAAGAGCCTGGGCATGCAGGTGATCG CCGAGGGCGTGGAAACCGCCGAGCAGGAGGCGTACATCATCGCCGAAGGTTGCAACGAAGGTCAGGGCTACCTGTACAGCAAGCCGCTGCCGGCCAGGGA GCTGACCCAGTACCTCAAGCAGGCGCGGCGCCTGAGCCAGGCCACCAGCAGCGAACGGCCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCAGAACAGGCGGCTGAACAGCCAGCCCGCCAATAGCGCGCTGCCCAGGCAGAGCAACGCGGCCCCCGCCGCCTGGCGGCGCAGTTGCACGGCGAGATCG TCCTCGCCCTGGCTGGAGAGAATGAAGGGATGCGCCTCCCCCGGCTTGCCGAGCTGGTGGCGGGTCGGCGCGGCGCTGCTTGCCCGATGCCGGTCCTCGG CCTCCAGCCGTGCCGCCAGGCGCACCCGGTTCCATTCGCGCTCGTCCAGCTCGCCGTTGCCGTCGCTGTCGAAGCGCGCCAGCAGCCCGTGGAAATCGCC CTTCCATTCACGGATCACCGCTCCCTGCGCCCGTTCGGCATCGAGTCCCTGGCGACCGCCACCGCTGCTGCGGAATTCGCCCAGCGCATAGAGCGGCTCG CCGGCATGCAGGCGCTCCTCGGTGTAGCGGTAGAGCCGCTCTCCGCCGACCAGGGTGCCGAAGCTCTCCAGCAGTCGCAGGGTATCGATCGGTGCTTCGC
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Amino Acid Sequence |
>diguanylate cyclase
MKLDSRHSLSLKLLRVVLLAALAVGVVLSCAQIVFDAYKAKQAVSSDAQRILAMVRDPSTQAVYSLDREMAMQVLEGLFQHEAVRQASIGHPGEPMLAEK SRPLLDLPTRWLTDPILGQERTFSIRLIGRPPYSEYYGDLKITLDTAPYGENFVTTSEIIFISGILRALAMGLVLFLVYHWMLTKPLSKIIEHLVSINPD RPSQHQLPLLKGHERNELGLWVTTANQLLASIESNSHLRREAEDNLLRISQYDFLTGLPNRQLLQQQLDQILDGAGRQQRRVAVLCLGLDDFKGINEQYT YQLGDQLLIALADRLRGHSARLGSLARLGGDQFALVQADIEQPYEAAELAQSILDGLEAPFEIDQHEVRLRATIGITLFPEDGETTEKLLQKAEQTMTLA KTRSRNRYQFYIASVDSEMRRRRELEKDLRDALQRHELHLVYQPQVDYRDHRVVGVEALLRWQHPLHGFVPPDLFIPLAEQNGSIFSIGEWVLDQACRQL REWHDQGFDDLRMAVNLSTVQLHHNALPRVVSNLLQVYRLPARSLELEVTETGLMEDISTAAQHLLSLRRAGALIAIDDFGTGYSSLSYLKSLPLDKIKI DKSFVQDLLQDEDDATIVRAIIQLGKSLGMQVIAEGVETAEQEAYIIAEGCNEGQGYLYSKPLPARELTQYLKQARRLSQATSSERP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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