Strain | Pseudomonas aeruginosa PS50 adkgi-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGGTTGTTGCGCCAGGGTTTCAATCGCGGCCTGTGCTGGGCCGTAGCCCGTGGAATGCTTTGACCCCGCACGGGGAGGAGCCGACATGGATAGCCATCAG CAGCCATACGCGTCGCAGGCGCAGGCCGATACCACCCTGTTTCCCGAGCAGACCCGCGAGAGTCTCCAGGCCCTGGCCGTCAAGTTGCAGCCGCTGATCG AGGGCCACCGCCTGGACAACCTGGTGGATCTGCTGTCACTGCTTTCGGATATCGTCGATCTGCTGGACCCGGCCATGGTGGACAGGCTGGCGCAGCTCTT CGAGCAGGTCACCAGTGTCGGTTGGTCAGTCGGTAACGCGGTACGCGTGGCCAAGGCGGAGCTGCTCCGAGAGCAGCCGCCAAGCCTGAAAGACCTGCTG CGGTTGTTGCGCGACGCCGATACCCGGCGCGGGCTGGCTCTCGTGCTGGGTAGCTTGCGCAGCCTGGGGTGCCAACTCGCCGCGGAGCAGGAGGTTGCCC
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DNA Sequence for Gene |
>Q095_02745
ATGGTGCATGACCTTCTCCGAGATCGTGCGGATCTAGAGGCGCGTTGGAACCCTTCCGCCTACATGCAGTTCGCCCGATTGCGCCAGCGGCCGGTGGTCG AGTTGCTGGACCATATCGAGCTGTGCTGTCCGGAACGGATCTACGATCTTGGCTGCGGAACCGGCATCGCCACCGAATTGCTCGCCCGCCGCTGGCCGCT GGCCGAACTGCACGGCGTGGACAGCTCCGTGGAGATGCTCGAGGAGGCCGCGCGCTTGCCGATCAAGGCCAGTTGGGAACGCGCCAACCTGCGCCACTGG TGCGCCGAGCGCCCTGCCAGCCTGCTGTTCGCAGCGGCGGTACTGCACTTTCTCGAAGATCACGGCAAGCTGCTGCCACGCCTGCTGGGGCAACTGGCTC CGGGAGGCTGCCTGGCGGCGCACATGCCGAACTGGCGCGATGCTTCCTGGTATCGCCTGATGCTCGATGCGCTGGACAGTGCGGGCCCCGGCGGTGCATC GCTGGGCAGCCCCGCGTTGCGCTATAGGCTGCATCGGCGCAATGTGCTGTCGCTGGACAACTACTACCGGCTACTGGCACCGCTGACGGCGGAGCTGGAC ATCTGGGAGACCGAGTACCTGCAAGTGGTGGACGGCAACGACCCGATCTTCGATTGGATCAAGGTCTCCGCCTTGCGTCCGGTGCTCGGCGAACTGGACG AGGAGGCGCGTCGGCGCTTCCTCGACCGTTACCTGGAACTGCTGCACCGTCACTATCCACGGGAACTGGATGGACGAACGCTGTTCCCGTTCCGCCGAGT ATTCATCGTCGCCAGTCTCGGCCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ACGGGCGTTTCAGTGATCGGAGAGAATGTCCACTGCGCCCGGCTTGTCGTAGGCGCCGAAGCGATCGACCAGGGTCGCGCTGGCGGCGTTCAGGCCCAGC ACGTCGACCTGCACGCCGCGCTGGCGAAAGCCCAGGACCACCTTGTCCAGTGCCGCGACGGCGGTGACGTCCCACAGGTGGGCGTGGCGCAGGTCGATGA GCACATGCTCCAGCGTCTCTTTCAGGTCGAAGGCAGCGACGAACCTGCCGGACGACGCGAAGAACACCTGCCCGCTCACCTGGTAGTGGCGGCGGGTGCC GTCGGCGGAGCGTTCGCTGTCGATATCGAGGTAGTGCCCGATCTTGTTGGCGAAGAACAGCGAGGCCAGAAGAACGCCGGCGACCACGCCGAAGGCCAGG TTGTGGGTGGCGAGGACCACGCCGACCGTCACCAGCATGACCAGGTTGGTCGATAGCGGGTAGCGCTTCAGGTTGCGGATCGACTCCCAGCGGAAGGTGC
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Amino Acid Sequence |
>trans-aconitate 2-methyltransferase
MVHDLLRDRADLEARWNPSAYMQFARLRQRPVVELLDHIELCCPERIYDLGCGTGIATELLARRWPLAELHGVDSSVEMLEEAARLPIKASWERANLRHW CAERPASLLFAAAVLHFLEDHGKLLPRLLGQLAPGGCLAAHMPNWRDASWYRLMLDALDSAGPGGASLGSPALRYRLHRRNVLSLDNYYRLLAPLTAELD IWETEYLQVVDGNDPIFDWIKVSALRPVLGELDEEARRRFLDRYLELLHRHYPRELDGRTLFPFRRVFIVASLGR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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