Pseudomonas aeruginosa PS50, Q095_02513
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PS50 adkgi-supercont1.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTCGACCAGACAAGACCATCCGGTCACTCTTAGACCTTCGTGTAGTAGTCTTGAAAAAACACTACAAAACGTTTGACGACGGATTTTTTCTAGAGCATGA TGGCCCCGCTCCCGCTAATCAGGGGCTCTGAAACGACGAGCTCCCGGTGCCTGCGCCGATACGCCCTCGGCCTCCACCGTGTTGATCTGCCCACAAGGCG GCTTGACGAGATTGCGACTGGAACGAAGTTGTCCTGAGGGACGGGGAAGCGTTTACGTATCAGCCAGATCGAAAGACTCGACAGCGAGTCGCCCACCGGC AACCACGAGCCGAACGGCACTTGAGCCAGTCGAGAAGCACGGTCCGCGAACTGTTCGTCTCCACCCCCTCCTCGGCGTCATTCTTCGCCACGGTCATTCT CTCGCCATGCAGCGGTGAGCCACCCGCAAGACAACCTTCACCAGCAGGTTTTGAGTGGGTCAGTCGGTGCTCAACCAATACATTTCTTGAAGGATTGACC
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| DNA Sequence for Gene |
>Q095_02513
ATGTCCGCATATCAGAACGAGATCAAGGCAGTTGCCGCGCTGAAAGAGAAGAACGGCAGCAGCTGGAGCGCGATCAACCCCGAGTACGCAGCTCGCATGC GTATCCAGAACCGCTTCAAGACCGGCCTGGATATCGCCAAGTACACCGCGGCCATCATGCGCAAGGACATGGCCGAATACGATGCGGACTCCTCCGTCTA CACCCAGTCGCTGGGTTGCTGGCACGGCTTCATCGGGCAGCAGAAGCTGATCTCGATCAAGAAGCACCTGAAGACCACCAACAAGCGCTACCTCTACCTG TCCGGTTGGATGGTCGCCGCGCTGCGCTCCGACTTCGGCCCGCTACCGGACCAGTCCATGCACGAGAAAACCGCGGTTTCCGGCCTGATCGAAGAGCTGT ACACCTTCCTGCGCCAGGCTGACGCCCGCGAGCTGGACCTGCTGTTCACCGGCCTGGACGCTGCCCGCGCCGCTGGCGACAAGGCCAAGGAAGCCGAGCT GCTGGCCCAGATCGACAACTTCGAAACCCACGTGGTGCCGATCATCGCCGACATCGACGCCGGCTTCGGCAACGCCGAGGCGACCTACCTGCTGGCCAAG AAGATGATCGAAGCCGGCGCCTGCTGCATCCAGATCGAAAACCAGGTGTCCGACGAGAAGCAGTGCGGCCACCAGGACGGCAAGGTCACCGTTCCGCACA TCGACTTCCTCGCCAAGATCAATGCCGTACGCTACGCCTTCCTCGAGCTGGGCGTGGACGATGGCGTGATCGTCGCCCGTACCGACTCCCTGGGCGCCGG CCTGACCAAGCAGATCGCCGTGACCAACGAGCCGGGCGACCTGGGCGACCTGTACAACTCCTTCCTGGATTGCGAAGAGATCTCCGAGGCCGAGCTGGGC AACGGCGACGTCGTGATCAAGCGCGAAGGCAAGCTGCTGCGTCCGAAGCGCCTGGCTTCCAACCTGTTCCAGTTCCGCAAGGGCACCGGCGAAGATCGCT GCGTCCTGGACTGCATCACCTCGCTGCAGAACGGCGCCGACCTGCTCTGGATCGAAACCGAGAAGCCGCACGTCGGCCAGATCAAGGCAATGGTCGATCG CATCCGCGAAGTGATTCCGAACGCCAAGCTGGTCTACAACAACAGCCCGTCCTTCAACTGGACCCTGAACTTCCGCCAGCAGGTGTTCGATGCGTTCGTC GCCGAAGGCAAGGACGTTTCCGCCTACGACCGCAACAAGCTGATGAGCGTCGAGTACGACGACACCGAGCTGGCCAAGGTCGCCGACGAGAAGATCCGCA CTTTCCAGCGCGATGGCTCGGCCCACGCCGGCATCTTCCACCACCTGATCACCCTGCCGACCTACCACACCGCCGCGCTGTCCACCGACAACCTGGCCAA GGGCTACTTCGCCGACGAAGGCATGCTGGCCTACGTGAAGGGCGTGCAGCGCCAGGAACTGCGCCAGGGCATCGCCTGCGTCAAGCACCAGAACATGGCG GGCTCCGACATCGGCGACAACCATAAAGAGTACTTCGCTGGCGAAGCCGCTCTGAAGGCCAGCGGCAAAGACAACACCATGAACCAGTTCCACTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGAACAGGGGCCAGCCGGGCAGCCACGATCTGCCCGGCCCGCCTCGCGAAAACCCCGGCTCCGGCCGGGGTTTTTCATTTCCGGATCATGGCAAAAGGCC TCGAGTGCCTGTCATCGTCCCGTCGCTTTCAGCGGTTAGCGTCAATGCTCCGTCGATCAGCCCACAAGGAGCACGTCCGTGAGCCTGGAGAAAAAAGATG CCATCCTGTTCGGTGATGGCGACGAGTTGCCCAGCAACCATTCGAACAACCCGCACATGAACGACCTGATCGCCGGCCTCGGCCGCCGCCAGGTCCTGGC CGGCGGCGCGGCGCTCGGCGCCCTCGCCTTCCTCGGCGTCGCGCTCCCCGCCAGCGCCGCTCCCGCCGAAGCGCAGGCGCCCGCCGCGGAAGGCCTGCGC GGCTTGCCTTTCAAACGCCGCAACCGCTTGCCCTTCGAAGCCATCGCCAGCGGCCGTGCCGATACCATCCGGGTGCCCGCCGGCTACAAGGCGACGCCCT
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| Amino Acid Sequence |
>isocitrate lyase
MSAYQNEIKAVAALKEKNGSSWSAINPEYAARMRIQNRFKTGLDIAKYTAAIMRKDMAEYDADSSVYTQSLGCWHGFIGQQKLISIKKHLKTTNKRYLYL SGWMVAALRSDFGPLPDQSMHEKTAVSGLIEELYTFLRQADARELDLLFTGLDAARAAGDKAKEAELLAQIDNFETHVVPIIADIDAGFGNAEATYLLAK KMIEAGACCIQIENQVSDEKQCGHQDGKVTVPHIDFLAKINAVRYAFLELGVDDGVIVARTDSLGAGLTKQIAVTNEPGDLGDLYNSFLDCEEISEAELG NGDVVIKREGKLLRPKRLASNLFQFRKGTGEDRCVLDCITSLQNGADLLWIETEKPHVGQIKAMVDRIREVIPNAKLVYNNSPSFNWTLNFRQQVFDAFV AEGKDVSAYDRNKLMSVEYDDTELAKVADEKIRTFQRDGSAHAGIFHHLITLPTYHTAALSTDNLAKGYFADEGMLAYVKGVQRQELRQGIACVKHQNMA GSDIGDNHKEYFAGEAALKASGKDNTMNQFH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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