Strain | Pseudomonas aeruginosa Z61 adkgo-supercont1.2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ATGGGCCGACTACCTGGCGGAGCTGGCCAGCGCCGGCAAGTCGCGCGACCCCGACGAGTCGGTCGTCAAGCTGATGCTCTGAAGCGCCGGGCCGAGTGCC CCTTCGCGGCACACGGCATCCAGGCGATTTTTCTCCGCTGCCCCGAACGAGGGCACGTCATTTGCAACATTCGCCCCGCAGACTGCCAGACCAGACATCC GGTCGGCGCGGTCGCCACGGCGAATGTCCTACCCTGCACGGCAGCAACGCTCTAGTCCGCAGGTCGGCCGCTCGCCGGGCCAGCCACGCCGGCCACCGAT GCTTCTGCCAGCTTGCACGCCAGCGGAAACTCGCGTAACCAAGACGGTGCAGCCCCTTGTCCGGGTTCCCTTCCCTGACGTGCGTCCGCCCCGCCCTGAA ACGTGCGGGTGGGCTGGTAGTCGAGCAGTAGCCGGCCGGACACCTGGTCCCCGGTTTCGTTGCGGTCCCCTGTTTCGCCTCGAACAATGGAGCGTTGCCG
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DNA Sequence for Gene |
>Q054_05005
ATGAGTCAGAAGAACAATAACGAGCTTCCCAAGCAAGCCGCGGAAAACACGCTGAACCTGAATCCGGTGATCGGCATCCGGGGCAAGGACCTGCTCACCT CCGCGCGCATGGTCCTGCTCCAGGCGGTGCGCCAGCCGCTGCACAGCACCAGGCACGTGGCGCATTTCAGCCTGGAGCTGAAGAACGTCCTGCTCGGCCA GTCGGAGCTACGCCCAGGCGATGACGACCGACGCTTTTCCGATCCGGCCTGGAGCCAGAATCCGCTGTACAAGCGCTACATGCAGACCTACCTGGCCTGG CGCAAGGAGCTGCACAGCTGGATCAGCCACAGCGACCTGTCGCCGCAGGACATCAGTCGTGGCCAGTTCGTCATCAACCTGCTGACCGAGGCGATGTCGC CGACCAACAGCCTGAGCAACCCGGCGGCGGTCAAGCGCTTCTTCGAGACCGGCGGCAAGAGCCTGCTGGACGGCCTCGGCCACCTGGCCAAGGACCTGGT GAACAACGGCGGGATGCCGAGCCAGGTGGACATGGACGCCTTCGAGGTGGGCAAGAACCTGGCCACCACCGAGGGCGCCGTGGTGTTCCGCAACGACGTG CTGGAACTGATCCAGTACCGGCCGATCACCGAGTCGGTGCACGAACGCCCGCTGCTGGTGGTGCCGCCGCAGATCAACAAGTTTTACGTCTTCGACCTGT CGCCGGACAAGAGCCTGGCGCGCTTCTGCCTGCGCAACGGCGTGCAGACCTTCATCGTCAGCTGGCGCAACCCGACCAAGTCGCAGCGCGAATGGGGCCT GACCACCTATATCGAGGCGCTCAAGGAGGCCATCGAGGTAGTCCTGTCGATCACCGGCAGCAAGGACCTCAACCTCCTCGGCGCCTGCTCCGGCGGGATC ACCACCGCGACCCTGGTCGGCCACTACGTGGCCAGCGGCGAGAAGAAGGTCAACGCCTTCACCCAACTGGTCAGCGTGCTCGACTTCGAACTGAATACCC AGGTCGCGCTGTTCGCCGACGAGAAGACCCTGGAGGCCGCCAAGCGTCGCTCCTACCAGTCCGGCGTGCTGGAGGGCAAGGACATGGCCAAGGTGTTCGC CTGGATGCGCCCCAACGACCTGATCTGGAACTACTGGGTCAACAACTACCTGCTCGGCAACCAGCCGCCGGCGTTCGACATCCTCTACTGGAACAACGAC ACCACGCGCCTGCCCGCCGCGCTGCACGGCGAGTTCGTCGAACTGTTCAAGAGCAACCCGCTGAACCGCCCCGACGCCCTGGAGGTCTCCGGCACGCCCA TCGACCTGAAGCAGGTGACTTGCGACTTCTACTGTGTCGCCGGTCTGAACGACCACATCACCCCCTGGGAGTCGTGCTACAAGTCGGCCAGGCTGCTGGG TGGCAAGTGCGAGTTCATCCTCTCCAACAGCGGTCACATCCAGAGCATCCTCAACCCACCGGGCAACCCCAAGGCACGCTTCATGACCAATCCGGAACTG CCCGCCGAGCCCAAGGCCTGGCTGGAACAGGCCGGCAAGCACGCCGACTCGTGGTGGTTGCACTGGCAGCAATGGTTGGCCGAACGCTCCGGCAAGACCC GCAAGGCGCCCGCCAACCTGGGCAACAAGACCTATCCGGCCGGCGAAGCCGCGCCCGGAACCTACGTGCATGAACGATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AAAGCGACCAGCCTGAAGAACAGCCGCAGGAGCGATCCGCGGCCTCCGCCGACGAAACCCCGCCAGCGCCTCCGGCGCGGCCCCGTGCCGCGCGGAAGCC GGCCAGGCCCCGTATCGCCGAGCCCGCGGCTGCGCCGCCGAGGACCCCGAGCATGCCCCAGCCCTTCGTCTTCCGGACCATCGACCTCGACGGCCAGACC ATCCGCACCGCAGTGCGGCCGGGCAAGGAAGGAAGCACTCCGCTGCTGATCTTCAACGGCATAGGCGCCAACCTGGAACTGGTGTTCCCCTTCGTCCAGG CGCTCGACCCGGAACTGGAGGTGATCGCCTTCGACGTTCCCGGCGTCGGCGGTTCCTCGACGCCCAGCGTGCCCTACCGCTTTCCCGGCCTGGCCAAGCT GGCGGCGCGGATGCTCGACTACCTGGACTACGGCCAGGTCAACGCGATCGGCGTGTCCTGGGGCGGCGCGCTGGCCCAGCAGTTCGCCCACGACTATCCG
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Amino Acid Sequence |
>poly(R)-hydroxyalkanoic acid synthase
MSQKNNNELPKQAAENTLNLNPVIGIRGKDLLTSARMVLLQAVRQPLHSTRHVAHFSLELKNVLLGQSELRPGDDDRRFSDPAWSQNPLYKRYMQTYLAW RKELHSWISHSDLSPQDISRGQFVINLLTEAMSPTNSLSNPAAVKRFFETGGKSLLDGLGHLAKDLVNNGGMPSQVDMDAFEVGKNLATTEGAVVFRNDV LELIQYRPITESVHERPLLVVPPQINKFYVFDLSPDKSLARFCLRNGVQTFIVSWRNPTKSQREWGLTTYIEALKEAIEVVLSITGSKDLNLLGACSGGI TTATLVGHYVASGEKKVNAFTQLVSVLDFELNTQVALFADEKTLEAAKRRSYQSGVLEGKDMAKVFAWMRPNDLIWNYWVNNYLLGNQPPAFDILYWNND TTRLPAALHGEFVELFKSNPLNRPDALEVSGTPIDLKQVTCDFYCVAGLNDHITPWESCYKSARLLGGKCEFILSNSGHIQSILNPPGNPKARFMTNPEL PAEPKAWLEQAGKHADSWWLHWQQWLAERSGKTRKAPANLGNKTYPAGEAAPGTYVHER
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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