Strain | Pseudomonas aeruginosa Z61 adkgo-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCCAGCCATAGTCCGCCGGATAGATGTCGCTGGTCAGGCGTTCCTCGTAGCCGTGCAACTGGTCGGGACCGCAGAAGTGCATCTTGCCCGACAACGCCGT GCGATAGCCGAGGTTGCGCAGGTAGTGGGCGTAGGTGGGGGTATCGGCGGCGAAGTCGGCGGCGTTGTCCCAGGCGCCGATGCGGGTAGGCAAGCGACCG CTGACCAGGGTGAAGCGCGACGGCGCGCAGAGCGGGCTGTTGCAGTACGCCGAGTCGAACACCACGGCCCGTTCGGCGAGGCGCGAGAGGTGAGGCATGC GCAGCACCGAGCGCGGATCGTGAAGCGGCAGCAGCGGCGCGGCCATCTGGTCGGCCATGATGAACAGGATGTTCGGCGAGGTCTTCATCGGGCGGCTTAT CCCATGCGATTGGGTTATGCGATAGTGCTGCGTCGATCATCAGTGCATCGAAATCCCTGGTAAACCGCATGGGGCTGGATGCGTTGGATAAGCCTGGCTT
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DNA Sequence for Gene |
>Q054_04592
ATGGGAGAACGCCTCATGCCGCTGTCCCTCGACCTGCTCCGGGTATTCGAGTCCGCCGCCCGCCAGCTCAGCTTCACCGCTGCCGCCGAGGAGCTGGGGA CCACTCAGCCTGCGGTCAGCCAGCAGATCAAACGCCTGGAGAAGGAGCTGGCGACCCCTCTGTTCCAGCGCGTCCATCGAGGCATCGTGCTCACCGACGC CGGCCAGCTCCTGCTCCGCCACGTGGCCGCCGGCCTCGAGACGATCGATGCCGGCATCGCCGCGCTGGGCGCGCGCCAGCGCCACGAGGTGCTCCAGGTG GCCACCGACTACGCCTTCGCCGCCTACTGGCTGATGCCGCGCCTTCCGCGCTTCCACCAGGCCCATCCGCATCTGGACGTGAGCCTGGTGACCAGCGAGC GCGGCCTGGCCGGCCAGCGCGGCGATATCGACGTGGCGATCCTGTTCGGCGACGGTCGTTCCAAGCACGGCGAAGCGCACCGGCTGTTTCGCGAGGAGGT GTTCCCGGTCTGTAGCCCGCGCCTGGTCGAGGGATTGCAGTTGCCGCTGGCCAAGGTGCACCTGGCGCGCCTGCCGATGCTGCATCTGAAGCCGGCGCAG CACGCCCGCTGGTTCGACTGGCCGGCGTTGTTCGAAGCGTTGGCCATCGATCGGCAGCCGATTCCGGCGGTGCTCAGCTTCGACAACTACACCTTGCTGA TCCAGGCGGCCATCGCCGGCCAGGGCGTGGCCATCGGCTGGCGCCACCTGGTCGACGGCCTGCTCGAACAGGGGCTGCTTTGCCGGCCCATTGGCGAGAG CTGCCTGTCGCGATACGGGTACTATGCGGTATTGCCGGAGCGCAAGCGGCGCCAGCGGCTGGTCGACGGTTTCGTCGACTGGCTGCAGGCCGAGTTGCAG GCCGGCGGCGCTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AGAGTTGACGATGAACGAGTATTCCACCCCCCGCATCCAGGGCTTCCATGCTCACGTCTATTTCGATGCGCAGAGCATCGAGCGAGCCCGCGCCCTTTGC GAAGAGGCGGCGCGGCGCTTTCCGCTGAAGATGGGGCGGGTCCATGAGCGGCCGGTAGGGCCGCATCCGGACTGGAGCTGCCAGCTGGCATTCGCTCCCG AGGTGTTCGGCGAGCTGGTGCCCTGGCTGGCCATCCATCGGCAGGACCTGGTGGTGTTCATCCACCCGGTCACCGGCAACGATCTGCTCGACCATCGCGA CCGAGCCATCTGGATGGGAGCCATTCGCCCGCTGGACCTGTCGATCCTGGACGAAGGCCCGCAACGCTATGACTTCGCCGTGCCTTGAGGCGCGGTCATC GTCATCCAGTCGTGCAGTTCGCATTGCAGCTCGCCCAGTGCCGTCACCAGGTCGTCGACGGCATCGGCGAGCTTGCGCACGGAGCTTTCGCCGCAGGCGA
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Amino Acid Sequence |
>LysR family transcriptional regulator
MGERLMPLSLDLLRVFESAARQLSFTAAAEELGTTQPAVSQQIKRLEKELATPLFQRVHRGIVLTDAGQLLLRHVAAGLETIDAGIAALGARQRHEVLQV ATDYAFAAYWLMPRLPRFHQAHPHLDVSLVTSERGLAGQRGDIDVAILFGDGRSKHGEAHRLFREEVFPVCSPRLVEGLQLPLAKVHLARLPMLHLKPAQ HARWFDWPALFEALAIDRQPIPAVLSFDNYTLLIQAAIAGQGVAIGWRHLVDGLLEQGLLCRPIGESCLSRYGYYAVLPERKRRQRLVDGFVDWLQAELQ AGGA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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