Strain | Pseudomonas aeruginosa Z61 adkgo-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AACGCGGGCTGACCGTGCTCGGCACCAGCGGCTACCTGGCGATGGTGATCCTCGGCTCCTACGTCGGCTACGTGGTCAGTGCCTTCCTCACCGACCTGAT CGGGCGCAAGAAGAACTTTGTCCTGTTCGCCGTCGGCTCCTTCACCGTGGTCCTGCTCTACACCCAGTTGCCGGTGAGCAACGGCGCCATGCTCTGGCTC GGCTTCCCGCTCGGCTTCTTCGCCTCGGGCATCTTCAGCGGCATGGGCTCGTTCCTCACCGAACTGTTCCCAACCCGCATCCGCGGCTCCGGCCAGGGCT TCTGCTACAACGCCGGGCGCGCCATCGCCGCGCTGTTCCCGATGCTGATCGGCATGCTCGGCCAGAAGCTCTCGCTGGGCCTGGGGATCGGCGCCTTCGC CGCGGTCTCCTACGGCGTGGTGATCCTCGCCGCCCTCAGCCTGCCGGAAACCCGCGGCAAGCAACTGGAACTCTGAGCCGTCGACCGAGGAAATCCCAGC
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DNA Sequence for Gene |
>Q054_01563
ATGCATCCCACTCCCCGCCTGGCTGCCGCGCTGCTCGCCGGCAGCGGGCTGGGCTGGCCGCTGCTCGCCCAGGCCGACCTGGTCGAGGACAGCCACGCCA GCCTCGAACTGCGCAACTTCTACTTCAACCGCGACTTCCGCCAGAGCGGCGCGCGCGACAACGCCGACGAATGGGCGCAGGGCTTCCTCCTGCGCCTGGA GTCCGGCTTCAGCGAAGGCACCGTCGGCTTCGGCGTCGACGCCATCGGCCTGCTCGGCCTCAAGCTCGACTCCGGCGGCGGCAGCGGCGGAACCGGGCTG CTGCCGGCCGACGGCTCCGCCGGGGGTTCCCAGGACGACTACGCCAAGCTCGGCCTGACCGCCAAGGCGCGGGTCTCCAACAGCCTGCTCAAGGTCGGCG CGCTGCACTTCAAGAGCCCGCTGGTCTCGGCCAACGACACCCGCCTGCTGCCGGAACTGTTCCGCGGCGCGCTGCTCGACGTGCAGGAGATCGACGGCCT GACCCTGCGCGGCGCGCACCTGGACCGCAACAAGCTGAACAGCTCCAGCGACTACCAGGTGTTCAGCGCCAACCGCATCGGCGGGCGCAGCGATGCCTTC GACTTCGCCGGCGGCGACTATCGCCTGACCCCGGCGCTGACCGCCAGCCTGCACCAGGGTCGGCTCAAGGACATCTACCGACAGACCTTCGCCAGCCTGG TACACACCCTCGACCTCGGCGGACAGCGTTCGCTCAAGAGCGACCTGCGCTTCGCCCGGGCCAGCGAGGACGGCGGCTTCCGCGAACTGGACAACCGCGC CTTCGGCGCCCTCTTCAGCCTGCGCCTGGGCGCCCACGCGGTGGCCGCCGGCTACCAGCGGATCAGTGGCGACGATCCCTATCCCTACATCGCCGGCAGC GACCCGTACCTGGTCAACTTCATCCAGATCGGCGACTTCGGCAACGTCGACGAGCGTTCCTGGCAACTGCGCTACGACTACGATTTCGGCGCGCTCGGCC TGCCCGGCCTGAGCTTCATGAGCCGCTACGTCTCCGGCGACAACGTCGCCCGCGGCGCGGCCAACGACGGCAAGGAATGGGAACGCGACACCGACCTCGG CTACGTGGTGCAGAGCGGGCCGCTGAAGAACCTCGGGGTGAAATGGCGCAACGCCACGGTGCGTTCGAATTTCGCCAACGACCTCGACGAAAATCGCCTG ATCCTCAGCTACAGCCTGGCGCTGTGGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGTCCGGCGAGCAATGACCTGAAGGAACCTGCATGAACAACCTGTTGTTGAACTGCGATATCGGCGAGAGCTTCGGTGCCTGGCGCATGGGCCTGGACGC CGAGGTGATGCCGCTGATCGATTGCGCCAACATCGCCTGCGGCTTCCACGCCGGCGATCCCGGCACCATGCGCCGCACCGTGGCCCTGGCGGTGGAGCAT GGCGTGCGCATCGGCGCGCACCCCGGCTACCCCGACCTGGTCGGCTTCGGCCGGCGCTCGCTGGCCTGCTCGGCGCAGGAAGTGGAAGACCTGCTGCTCT ACCAGATCGGCGCCCTCGACGGACTCTGCCGCGCCCAGGGCACGCGGGTACGCTACGTCAAGCCGCATGGCGCGCTGTACCAGGACATGATGCGCGACCC GGCGATCCTCGCCGCCGTGCTGCGCGCACTGGCGGCCTACGACCGCACCCTGCCGCTGATGCTGATGAGCACCCGCGACAACACCGCGGCGCGCGCGCTG
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Amino Acid Sequence |
>hypothetical protein
MHPTPRLAAALLAGSGLGWPLLAQADLVEDSHASLELRNFYFNRDFRQSGARDNADEWAQGFLLRLESGFSEGTVGFGVDAIGLLGLKLDSGGGSGGTGL LPADGSAGGSQDDYAKLGLTAKARVSNSLLKVGALHFKSPLVSANDTRLLPELFRGALLDVQEIDGLTLRGAHLDRNKLNSSSDYQVFSANRIGGRSDAF DFAGGDYRLTPALTASLHQGRLKDIYRQTFASLVHTLDLGGQRSLKSDLRFARASEDGGFRELDNRAFGALFSLRLGAHAVAAGYQRISGDDPYPYIAGS DPYLVNFIQIGDFGNVDERSWQLRYDYDFGALGLPGLSFMSRYVSGDNVARGAANDGKEWERDTDLGYVVQSGPLKNLGVKWRNATVRSNFANDLDENRL ILSYSLALW
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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