Pseudomonas aeruginosa Z61, Q054_00742

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa Z61 adkgo-supercont1.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCTGCAGAAGCTCGAGGACGAGGACGACGGCAGCGTCTACTACACGCGTATCGCCTGCAAGCTGCTCGACCTGCAAAGCTGCCGCTGCACCAACTACGCC GAGCGCATCCGTTTCGTCCCCGACTGTATCCAGCTCACCCCGGCGCAGGCCGACGAGTTCCAGTGGTTGCCGCCGACCTGCGGCTATCGCCTGGTTGCCG AAGGCAAGGACCTGCCGCTCTGGCACCACCTGGTCTGCGGCGACCCGGAGCGGGTCCACAAGGAACGCATTTCCCAGTCCGGGCGCATGCTCAGCGAGAC CCAGGTGGCCGAGGACGACTGGGAGGACTACCTGATCTTCCGCGCCGGCTGAGCTCGCGTCCGTCGCACTTCCTTACCTTGTGAAATGATATGTATTATC ATTCGCATATTTGCAAGGGACTTCCGTATCCGACGGAAGCGGGGAGGCGAGGTGTTGCAGCGGGTCAACGGCGCGGGGGGCGCCGCCGGAGGATGCACGG
DNA Sequence for Gene
>Q054_00742
ATGGATGAGCGCTTCCGTGGTTCCGTCTCGCATGCCTATCAGGCGTTCCATGGCGAGTTGCTGCGCTTCCTGCGCAAGCACCTGGGCAGTTCGGCGGACG CCGCCGACCTCGCCCAGGATACTTTCGCCCAGTGGCTGAAATGGCCGGGCCGGCAATCGGTCGAGCAGCCGCGCGCATTTCTTTTCCAGATCGCCCGCAA CCTGTTGCGCGACCATTGGCGCCGGCAGCAGAGCCGCGGCCAGGATCTCGACCGGCCGGCGGCGAACGACGAACCCGCCGCGCTGGAAGGCGAGGCGGCC GGGCCGGGCGAGCGTTTCGAACAGCAGCAGCGTCTCAGCCACCTGGCGGCCGCGCTGGCCGAGCTGCCGCCGCGGCGGCGCGAAGCGTTCGTCCTGCACA AGTTCGACGGCCTGTCCCAGGTCGAAGTGGCCGAGCGCATGGGAATCTCCCTGAGCATGGTGGAAAAGCACATCGCCAGCGCCTTGCTGCACTGCAAGCG GCGGCTTGGCCAGGGAGGCGAAGGATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AGCCGCTGGAACGACTGGAACCGCTGTTCGCAGACGAAACCGAAGAGGACATCGATCACCGCGCCGCCTACTGGTTCAGCCGGCGTCGTTCCGGGCATTT CAGCGCTGCCTGCCGGGCCGAGCTGGAGGATTGGCTACGCGCCGATCCGCGCCATCGCGAAGCGCTCGAGGGCATGGAGCGGCTCTGGCGAGAGTTCGAC GGCCTGCCGCGCCCGGCGCTGGACGATATTCCCGAGCCGGTGCCGGCCTGGCGCCTGCCCCGGGCGCTGGCGGCGGCGTTCTTCGTATTCTGCGCGCTGC TCGTCGCCACCCTGTTCTGGCGCGACCAGTCGCTCGGACCGAACCTCGCCTACGGCACGGCACCTGGCGAGCAGCGCGAGGTGGTCCTGGCGGACGGATC GAAGCTGTTCCTCGACGTCGATACCCAGGTGCAGGTGCGTTACGCCGAGCGCACCCGCGACGTGCTGTTGGAGAAAGGCGAGGTGTTCTTCGTGGTCAGC
Amino Acid Sequence
>RNA polymerase sigma factor
MDERFRGSVSHAYQAFHGELLRFLRKHLGSSADAADLAQDTFAQWLKWPGRQSVEQPRAFLFQIARNLLRDHWRRQQSRGQDLDRPAANDEPAALEGEAA GPGERFEQQQRLSHLAAALAELPPRRREAFVLHKFDGLSQVEVAERMGISLSMVEKHIASALLHCKRRLGQGGEG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site